Variant report

Variant	rs71511926
Chromosome Location	chr8:49415615-49415616
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49410603..49416175-chr8:49423365..49428715,9	MCF-7	breast:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10504064	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10504065	0.83[EUR][1000 genomes]
rs13256488	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13265583	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13268764	0.88[EUR][1000 genomes]
rs13280598	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17624216	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17701535	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34020503	0.91[EUR][1000 genomes]
rs34643739	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34738967	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34743445	1.00[EUR][1000 genomes]
rs34907852	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35155538	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35197548	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35461457	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35698540	0.97[EUR][1000 genomes]
rs35803425	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35832338	0.86[EUR][1000 genomes]
rs35886671	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6987448	0.94[EUR][1000 genomes]
rs71511918	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs71511920	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs71511921	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs71511925	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs71511927	0.91[EUR][1000 genomes]
rs71511928	0.91[EUR][1000 genomes]
rs7826101	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs872140	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs872141	0.94[EUR][1000 genomes]
rs964460	0.86[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49413200-49415800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr8:49413400-49416800	Enhancers	Fetal Lung	lung
3	chr8:49413600-49418800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr8:49414200-49420000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr8:49414400-49416600	Weak transcription	Fetal Muscle Trunk	muscle
6	chr8:49414400-49416600	Weak transcription	Pancreas	Pancrea
7	chr8:49414400-49419800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr8:49414600-49416400	Weak transcription	Hela-S3	cervix
9	chr8:49414600-49416600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:49414600-49416600	Weak transcription	Placenta	Placenta
11	chr8:49414600-49416800	Weak transcription	Stomach Mucosa	stomach
12	chr8:49414600-49418600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr8:49414600-49418600	Weak transcription	Fetal Muscle Leg	muscle
14	chr8:49414600-49427000	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr8:49414800-49416400	Weak transcription	NHEK	skin
16	chr8:49415400-49416200	Enhancers	Esophagus	oesophagus
17	chr8:49415400-49416400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr8:49415400-49416600	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr8:49415400-49416600	Weak transcription	A549	lung
20	chr8:49415400-49422000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr8:49415600-49415800	Enhancers	HSMMtube	muscle
22	chr8:49415600-49420400	Weak transcription	NHDF-Ad	bronchial

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