Variant report

Variant	rs964460
Chromosome Location	chr8:49478630-49478631
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49471240..49473521-chr8:49477314..49479923,2	MCF-7	breast:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10504064	0.86[EUR][1000 genomes]
rs10504065	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13250857	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13251934	1.00[JPT][hapmap]
rs13256488	0.89[EUR][1000 genomes]
rs13265583	0.86[EUR][1000 genomes]
rs13268764	0.80[EUR][1000 genomes]
rs13269670	1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs13278035	1.00[JPT][hapmap]
rs13280598	0.89[EUR][1000 genomes]
rs17624216	0.89[EUR][1000 genomes]
rs17701535	0.86[EUR][1000 genomes]
rs34020503	0.83[EUR][1000 genomes]
rs34313379	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34643739	0.89[EUR][1000 genomes]
rs34738967	0.89[EUR][1000 genomes]
rs34743445	0.86[EUR][1000 genomes]
rs34907852	0.86[EUR][1000 genomes]
rs35155538	0.86[EUR][1000 genomes]
rs35197548	0.89[EUR][1000 genomes]
rs35461457	0.89[EUR][1000 genomes]
rs35698540	0.89[EUR][1000 genomes]
rs35803425	0.89[EUR][1000 genomes]
rs35832338	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35886671	0.89[EUR][1000 genomes]
rs6987448	0.86[EUR][1000 genomes]
rs71511918	0.89[EUR][1000 genomes]
rs71511920	0.89[EUR][1000 genomes]
rs71511921	0.89[EUR][1000 genomes]
rs71511925	0.89[EUR][1000 genomes]
rs71511926	0.86[EUR][1000 genomes]
rs71511927	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs71511928	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs71511931	0.91[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7826101	0.86[EUR][1000 genomes]
rs872140	0.86[EUR][1000 genomes]
rs872141	0.86[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49470600-49482400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr8:49476800-49478800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr8:49477200-49481200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr8:49477400-49488800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr8:49477800-49486400	Weak transcription	Ovary	ovary
6	chr8:49478200-49483800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr8:49478400-49481400	Weak transcription	Fetal Lung	lung
8	chr8:49478400-49481600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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