Variant report
| Variant | rs34738967 |
|---|---|
| Chromosome Location | chr8:49399229-49399230 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:38)
| rs_ID | r2[population] |
|---|---|
| rs10504064 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs10504065 | 0.86[EUR][1000 genomes] |
| rs13256488 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs13265583 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs13268764 | 0.91[EUR][1000 genomes] |
| rs13278304 | 0.83[EUR][1000 genomes] |
| rs13279986 | 0.83[EUR][1000 genomes] |
| rs13280598 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs17624216 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs17701535 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs34020503 | 0.94[EUR][1000 genomes] |
| rs34643739 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs34743445 | 0.97[EUR][1000 genomes] |
| rs34907852 | 0.81[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs35106100 | 0.83[EUR][1000 genomes] |
| rs35155538 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs35197548 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs35461457 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs35659888 | 0.83[EUR][1000 genomes] |
| rs35698540 | 1.00[EUR][1000 genomes] |
| rs35803425 | 1.00[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs35832338 | 0.89[EUR][1000 genomes] |
| rs35886671 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs6987448 | 0.97[EUR][1000 genomes] |
| rs71511909 | 0.83[EUR][1000 genomes] |
| rs71511910 | 0.83[EUR][1000 genomes] |
| rs71511911 | 0.83[EUR][1000 genomes] |
| rs71511918 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs71511920 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs71511921 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs71511925 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs71511926 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs71511927 | 0.94[EUR][1000 genomes] |
| rs71511928 | 0.94[EUR][1000 genomes] |
| rs7826101 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs872140 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs872141 | 0.97[EUR][1000 genomes] |
| rs964460 | 0.89[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:49398600-49405200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
