Variant report

Variant	rs13278304
Chromosome Location	chr8:49305799-49305800
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49302164..49305075-chr8:49305567..49309028,3	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10504064	0.85[EUR][1000 genomes]
rs10504065	1.00[AFR][1000 genomes]
rs13250857	1.00[AFR][1000 genomes]
rs13256488	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs13265583	0.85[EUR][1000 genomes]
rs13268764	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13269670	1.00[AFR][1000 genomes]
rs13279986	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13280598	0.83[EUR][1000 genomes]
rs17624216	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs17701535	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs34020503	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34313379	1.00[AFR][1000 genomes]
rs34643739	0.83[EUR][1000 genomes]
rs34738967	0.83[EUR][1000 genomes]
rs34743445	1.00[AFR][1000 genomes]
rs34821372	0.81[AMR][1000 genomes]
rs34907852	1.00[AFR][1000 genomes]
rs35094003	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35106100	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35155538	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs35197548	0.83[EUR][1000 genomes]
rs35461457	0.83[EUR][1000 genomes]
rs35659888	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35698540	0.83[EUR][1000 genomes]
rs35803425	1.00[AFR][1000 genomes]
rs35832338	1.00[AFR][1000 genomes]
rs35886671	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs6987448	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs71511909	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71511910	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71511911	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71511918	0.83[EUR][1000 genomes]
rs71511920	0.83[EUR][1000 genomes]
rs71511921	0.83[EUR][1000 genomes]
rs71511925	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs71511928	1.00[AFR][1000 genomes]
rs71511931	1.00[AFR][1000 genomes]
rs7826101	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs872140	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs872141	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49294600-49308400	Weak transcription	Fetal Lung	lung
2	chr8:49294800-49308800	Weak transcription	NHLF	lung
3	chr8:49294800-49309600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:49295000-49309000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:49297800-49306600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:49297800-49309200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr8:49298200-49308600	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr8:49303000-49308400	Weak transcription	Ovary	ovary
9	chr8:49303000-49309000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr8:49303000-49309200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr8:49303200-49309000	Weak transcription	NHDF-Ad	bronchial
12	chr8:49303200-49309200	Weak transcription	Osteobl	bone
13	chr8:49303800-49308800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr8:49304000-49308600	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr8:49304400-49308800	Weak transcription	HSMM	muscle
16	chr8:49304600-49308400	Weak transcription	Fetal Muscle Leg	muscle
17	chr8:49304600-49308800	Weak transcription	Placenta	Placenta
18	chr8:49304600-49309000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr8:49304800-49306800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr8:49304800-49308800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr8:49305000-49309000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr8:49305600-49305800	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr8:49305600-49306000	Enhancers	Lung	lung

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