Variant report

Variant	rs7151467
Chromosome Location	chr14:24621850-24621851
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr14:24621701-24625095	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:24615864..24619238-chr14:24619913..24622350,3	K562	blood:
2	chr14:24619834..24622510-chr14:24624101..24626230,2	K562	blood:

Variant related genes	Relation type
RNF31	TF binding region
ENSG00000100911	Chromatin interaction
ENSG00000092098	Chromatin interaction

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10131288	1.00[ASN][1000 genomes]
rs10132189	1.00[ASN][1000 genomes]
rs10136993	1.00[ASN][1000 genomes]
rs10140260	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10142080	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10142310	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10143943	1.00[ASN][1000 genomes]
rs10144791	1.00[ASN][1000 genomes]
rs10146665	1.00[ASN][1000 genomes]
rs17101758	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28373297	1.00[EUR][1000 genomes]
rs28396996	1.00[ASN][1000 genomes]
rs28435365	1.00[ASN][1000 genomes]
rs28533649	1.00[ASN][1000 genomes]
rs28589355	1.00[ASN][1000 genomes]
rs28636804	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4470080	1.00[ASN][1000 genomes]
rs8005722	1.00[ASN][1000 genomes]
rs8008047	1.00[ASN][1000 genomes]
rs8011199	1.00[ASN][1000 genomes]
rs8012049	1.00[ASN][1000 genomes]
rs8019514	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3405661	chr14:24189883-24670942	Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
2	esv1827678	chr14:24520544-24663325	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	106 gene(s)	inside rSNPs	diseases
3	nsv869985	chr14:24578013-24652669	Genic enhancers Flanking Active TSS Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
4	nsv901498	chr14:24591892-24662177	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	74 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:24617600-24630400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr14:24617800-24626800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr14:24617800-24629800	Weak transcription	Right Atrium	heart
4	chr14:24618000-24622200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
5	chr14:24618000-24622200	Strong transcription	Primary B cells from cord blood	blood
6	chr14:24618000-24622200	Strong transcription	A549	lung
7	chr14:24618000-24622400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr14:24618000-24622800	Strong transcription	Rectal Smooth Muscle	rectum
9	chr14:24618000-24626000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr14:24618000-24627400	Strong transcription	Muscle Satellite Cultured Cells	--
11	chr14:24618000-24629000	Strong transcription	Placenta	Placenta
12	chr14:24618000-24629400	Strong transcription	Fetal Intestine Small	intestine
13	chr14:24618000-24630000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr14:24618000-24630200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr14:24618000-24630400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr14:24618200-24622000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
17	chr14:24618200-24622200	Strong transcription	Osteobl	bone
18	chr14:24618200-24622600	Strong transcription	HUES64 Cell Line	embryonic stem cell
19	chr14:24618200-24622600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
20	chr14:24618200-24622600	Strong transcription	Brain Hippocampus Middle	brain
21	chr14:24618200-24622600	Strong transcription	Brain Inferior Temporal Lobe	brain
22	chr14:24618200-24622800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr14:24618200-24622800	Strong transcription	Fetal Lung	lung
24	chr14:24618200-24629000	Strong transcription	Fetal Thymus	thymus
25	chr14:24618200-24629400	Strong transcription	Primary monocytes fromperipheralblood	blood
26	chr14:24618200-24629400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr14:24618200-24629400	Strong transcription	Fetal Intestine Large	intestine
28	chr14:24618200-24629600	Weak transcription	Fetal Heart	heart
29	chr14:24618200-24630000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr14:24618200-24630000	Strong transcription	HUES48 Cell Line	embryonic stem cell
31	chr14:24618400-24622000	Strong transcription	Colon Smooth Muscle	Colon
32	chr14:24618400-24622200	Strong transcription	H1 Cell Line	embryonic stem cell
33	chr14:24618400-24622200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr14:24618400-24622800	Strong transcription	NH-A	brain
35	chr14:24618400-24627800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr14:24618400-24629600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
37	chr14:24618400-24629800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr14:24618400-24629800	Strong transcription	Rectal Mucosa Donor 29	rectum
39	chr14:24618400-24630000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr14:24618600-24622000	Strong transcription	HUVEC	blood vessel
41	chr14:24618600-24622200	Strong transcription	H9 Cell Line	embryonic stem cell
42	chr14:24618600-24622200	Strong transcription	Rectal Mucosa Donor 31	rectum
43	chr14:24618600-24622400	Strong transcription	Brain Cingulate Gyrus	brain
44	chr14:24618600-24622600	Strong transcription	Aorta	Aorta
45	chr14:24618600-24622800	Strong transcription	HUES6 Cell Line	embryonic stem cell
46	chr14:24618600-24622800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr14:24618600-24622800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr14:24618600-24624800	Strong transcription	Fetal Muscle Leg	muscle
49	chr14:24618600-24628000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
50	chr14:24618600-24628000	Strong transcription	Ovary	ovary

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