Variant report

Variant rs71580441
Chromosome Location chr5:146994947-146994948
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146957000-146996200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr5:146957800-147038000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr5:146977400-147012200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr5:146987800-147001000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr5:146988000-147015000 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr5:146988200-146998200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:146988400-147000400 Strong transcription Cortex derived primary cultured neurospheres brain
8 chr5:146989000-147003000 Weak transcription Fetal Muscle Trunk muscle
9 chr5:146990200-147015400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr5:146990400-147004000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr5:146990600-147022600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr5:146990800-147008600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:146991000-146996000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr5:146991400-147014600 Weak transcription Fetal Stomach stomach
15 chr5:146991400-147022800 Weak transcription Stomach Smooth Muscle stomach
16 chr5:146991600-146995000 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr5:146991800-146996400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr5:146991800-146999200 Strong transcription iPS-18 Cell Line embryonic stem cell
19 chr5:146991800-146999600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr5:146991800-147001000 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr5:146991800-147002400 Weak transcription Thymus Thymus
22 chr5:146992000-147012200 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr5:146992200-146995400 Weak transcription Primary hematopoietic stem cells blood
24 chr5:146992200-147013000 Strong transcription iPS-20b Cell Line embryonic stem cell
25 chr5:146992400-146996200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr5:146992400-146996800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:146992400-146996800 Weak transcription Fetal Brain Male brain
28 chr5:146992400-146997600 Strong transcription Fetal Brain Female brain
29 chr5:146992400-147000200 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr5:146992400-147015600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr5:146992800-146997600 Strong transcription Primary T cells from cord blood blood
32 chr5:146992800-147000800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr5:146993000-146999400 Strong transcription Brain Angular Gyrus brain
34 chr5:146993200-146995200 Strong transcription H1 Cell Line embryonic stem cell
35 chr5:146993400-146995600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:146993400-146997800 Strong transcription Brain Cingulate Gyrus brain
37 chr5:146993400-146999800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr5:146993400-147003600 Weak transcription NH-A brain
39 chr5:146993600-146997600 Strong transcription Brain Inferior Temporal Lobe brain
40 chr5:146993800-146995800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr5:146993800-146997200 Weak transcription Liver Liver
42 chr5:146993800-146997600 Strong transcription Brain Substantia Nigra brain
43 chr5:146994000-146995800 Weak transcription Fetal Lung lung
44 chr5:146994200-146995200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
45 chr5:146994200-146998000 Strong transcription Brain Hippocampus Middle brain
46 chr5:146994200-147015800 Weak transcription Primary B cells from cord blood blood
47 chr5:146994400-146995200 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr5:146994400-146997600 Strong transcription Brain Anterior Caudate brain
49 chr5:146994400-146998000 Strong transcription Brain Germinal Matrix brain
50 chr5:146994800-146995200 Strong transcription H9 Cell Line embryonic stem cell

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