The 2.0 version of rSNPBase

Variant report

Variant rs35285805
Chromosome Location chr5:147037393-147037394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146957800-147038000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:147009800-147051200 Weak transcription Fetal Muscle Trunk muscle
3 chr5:147013000-147038400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr5:147015400-147050000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:147016400-147052400 Weak transcription Primary B cells from cord blood blood
6 chr5:147016600-147037400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:147016600-147037800 Weak transcription Fetal Stomach stomach
8 chr5:147016600-147038200 Weak transcription Brain Angular Gyrus brain
9 chr5:147016600-147047400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr5:147021400-147042800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr5:147022800-147037600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr5:147023200-147037600 Weak transcription Thymus Thymus
13 chr5:147023200-147037800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr5:147023800-147037400 Weak transcription Fetal Lung lung
15 chr5:147024200-147038400 Weak transcription Brain Cingulate Gyrus brain
16 chr5:147024600-147037800 Weak transcription Brain Anterior Caudate brain
17 chr5:147024800-147037600 Weak transcription Primary T cells fromperipheralblood blood
18 chr5:147025200-147041200 Weak transcription Brain Hippocampus Middle brain
19 chr5:147025200-147053000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr5:147025400-147037400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr5:147025400-147037400 Weak transcription Fetal Thymus thymus
22 chr5:147025400-147038200 Weak transcription Brain Substantia Nigra brain
23 chr5:147025400-147038400 Weak transcription Stomach Smooth Muscle stomach
24 chr5:147025400-147040400 Weak transcription H9 Cell Line embryonic stem cell
25 chr5:147027400-147038200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr5:147028600-147038200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr5:147028600-147038200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr5:147029000-147037600 Weak transcription H1 Cell Line embryonic stem cell
29 chr5:147029800-147038600 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr5:147030200-147037600 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr5:147030200-147037600 Weak transcription Primary T cells from cord blood blood
32 chr5:147033000-147037800 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr5:147033000-147038200 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr5:147035000-147039400 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr5:147035400-147037400 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr5:147035800-147039000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr5:147035800-147052800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr5:147036200-147037400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr5:147036200-147038200 Weak transcription Liver Liver
40 chr5:147036400-147042000 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr5:147036800-147037800 ZNF genes & repeats Primary hematopoietic stem cells blood
42 chr5:147036800-147038000 ZNF genes & repeats Brain Germinal Matrix brain
43 chr5:147036800-147038200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
44 chr5:147036800-147039200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
45 chr5:147037000-147037800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr5:147037000-147037800 Strong transcription Fetal Brain Male brain
47 chr5:147037200-147037600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr5:147037200-147037800 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr5:147037200-147041400 Strong transcription Fetal Brain Female brain
50 chr5:147037200-147046600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015