The 2.0 version of rSNPBase

Variant report

Variant rs2304037
Chromosome Location chr5:147008956-147008957
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146957800-147038000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:146977400-147012200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr5:146988000-147015000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr5:146990200-147015400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr5:146990600-147022600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr5:146991400-147014600 Weak transcription Fetal Stomach stomach
7 chr5:146991400-147022800 Weak transcription Stomach Smooth Muscle stomach
8 chr5:146992000-147012200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr5:146992200-147013000 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr5:146992400-147015600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr5:146994200-147015800 Weak transcription Primary B cells from cord blood blood
12 chr5:146995200-147015200 Weak transcription H9 Cell Line embryonic stem cell
13 chr5:146995200-147015200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr5:146995800-147015200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr5:146995800-147020200 Weak transcription Primary T cells fromperipheralblood blood
16 chr5:146997600-147015600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr5:146997600-147018600 Weak transcription Fetal Brain Male brain
18 chr5:146998000-147015200 Weak transcription Brain Hippocampus Middle brain
19 chr5:146999200-147017800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr5:146999400-147025400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr5:146999600-147010800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr5:146999800-147019800 Weak transcription Primary hematopoietic stem cells blood
23 chr5:147001000-147011200 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr5:147001800-147010200 Strong transcription Fetal Brain Female brain
25 chr5:147002000-147010400 Strong transcription Cortex derived primary cultured neurospheres brain
26 chr5:147002200-147009600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:147002200-147015400 Weak transcription Brain Angular Gyrus brain
28 chr5:147002600-147012000 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr5:147003400-147009000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr5:147004800-147009400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr5:147006600-147012000 Weak transcription Brain Substantia Nigra brain
32 chr5:147006600-147022400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr5:147006800-147015000 Weak transcription Brain Germinal Matrix brain
34 chr5:147006800-147025200 Weak transcription Fetal Intestine Small intestine
35 chr5:147007000-147009000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr5:147007000-147015400 Weak transcription Brain Cingulate Gyrus brain
37 chr5:147007200-147018200 Weak transcription Fetal Thymus thymus
38 chr5:147007800-147009400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr5:147007800-147018600 Weak transcription Fetal Lung lung
40 chr5:147008000-147009000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr5:147008000-147009600 Strong transcription Brain Anterior Caudate brain
42 chr5:147008000-147010400 Strong transcription H1 Cell Line embryonic stem cell
43 chr5:147008200-147009400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr5:147008200-147009400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:147008200-147013000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr5:147008400-147010200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr5:147008400-147012400 Weak transcription Liver Liver
48 chr5:147008400-147020400 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr5:147008600-147009200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr5:147008600-147011200 Strong transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015