The 2.0 version of rSNPBase

Variant report

Variant rs12656104
Chromosome Location chr5:147021429-147021430
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146957800-147038000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:146990600-147022600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr5:146991400-147022800 Weak transcription Stomach Smooth Muscle stomach
4 chr5:146999400-147025400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr5:147006600-147022400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr5:147006800-147025200 Weak transcription Fetal Intestine Small intestine
7 chr5:147009400-147027200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:147009400-147033200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr5:147009800-147051200 Weak transcription Fetal Muscle Trunk muscle
10 chr5:147010800-147028600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr5:147013000-147027400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr5:147013000-147030200 Strong transcription iPS-18 Cell Line embryonic stem cell
13 chr5:147013000-147038400 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr5:147013200-147024600 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr5:147013600-147025800 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr5:147014000-147029800 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr5:147014000-147030400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:147014200-147030400 Strong transcription iPS-20b Cell Line embryonic stem cell
19 chr5:147015000-147030000 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr5:147015200-147029000 Strong transcription H1 Cell Line embryonic stem cell
21 chr5:147015400-147025600 Strong transcription HUES6 Cell Line embryonic stem cell
22 chr5:147015400-147050000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr5:147016000-147024400 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr5:147016200-147024600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr5:147016400-147022400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr5:147016400-147052400 Weak transcription Primary B cells from cord blood blood
27 chr5:147016600-147022200 Weak transcription H9 Cell Line embryonic stem cell
28 chr5:147016600-147022200 Weak transcription Thymus Thymus
29 chr5:147016600-147022400 Weak transcription Brain Substantia Nigra brain
30 chr5:147016600-147022800 Weak transcription Brain Anterior Caudate brain
31 chr5:147016600-147037400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr5:147016600-147037800 Weak transcription Fetal Stomach stomach
33 chr5:147016600-147038200 Weak transcription Brain Angular Gyrus brain
34 chr5:147016600-147047400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr5:147017800-147026000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr5:147018200-147025400 Strong transcription Fetal Thymus thymus
37 chr5:147018200-147025600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr5:147018600-147025000 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr5:147018800-147025400 Strong transcription Brain Inferior Temporal Lobe brain
40 chr5:147019400-147022000 Weak transcription Brain Hippocampus Middle brain
41 chr5:147019400-147023600 Weak transcription Liver Liver
42 chr5:147019400-147024600 Weak transcription Fetal Muscle Leg muscle
43 chr5:147019800-147022400 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr5:147019800-147023400 Weak transcription HepG2 liver
45 chr5:147020000-147022200 Weak transcription Fetal Lung lung
46 chr5:147020000-147037000 Weak transcription Fetal Brain Male brain
47 chr5:147020200-147023400 Strong transcription Brain Germinal Matrix brain
48 chr5:147020600-147022400 Weak transcription Primary T cells fromperipheralblood blood
49 chr5:147021000-147025400 Strong transcription Primary T cells from cord blood blood
50 chr5:147021200-147022400 Weak transcription Brain Cingulate Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015