The 2.0 version of rSNPBase

Variant report

Variant rs2053050
Chromosome Location chr5:147030267-147030268
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146957800-147038000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:147009400-147033200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr5:147009800-147051200 Weak transcription Fetal Muscle Trunk muscle
4 chr5:147013000-147038400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr5:147014000-147030400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:147014200-147030400 Strong transcription iPS-20b Cell Line embryonic stem cell
7 chr5:147015400-147050000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr5:147016400-147052400 Weak transcription Primary B cells from cord blood blood
9 chr5:147016600-147037400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:147016600-147037800 Weak transcription Fetal Stomach stomach
11 chr5:147016600-147038200 Weak transcription Brain Angular Gyrus brain
12 chr5:147016600-147047400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr5:147020000-147037000 Weak transcription Fetal Brain Male brain
14 chr5:147021400-147037200 Weak transcription Fetal Brain Female brain
15 chr5:147021400-147042800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:147022800-147037600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr5:147023200-147037600 Weak transcription Thymus Thymus
18 chr5:147023200-147037800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr5:147023400-147036800 Weak transcription Brain Germinal Matrix brain
20 chr5:147023800-147037400 Weak transcription Fetal Lung lung
21 chr5:147024200-147038400 Weak transcription Brain Cingulate Gyrus brain
22 chr5:147024600-147035600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr5:147024600-147037800 Weak transcription Brain Anterior Caudate brain
24 chr5:147024800-147037600 Weak transcription Primary T cells fromperipheralblood blood
25 chr5:147025200-147041200 Weak transcription Brain Hippocampus Middle brain
26 chr5:147025200-147053000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr5:147025400-147034800 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr5:147025400-147037400 Weak transcription Brain Inferior Temporal Lobe brain
29 chr5:147025400-147037400 Weak transcription Fetal Thymus thymus
30 chr5:147025400-147038200 Weak transcription Brain Substantia Nigra brain
31 chr5:147025400-147038400 Weak transcription Stomach Smooth Muscle stomach
32 chr5:147025400-147040400 Weak transcription H9 Cell Line embryonic stem cell
33 chr5:147025600-147031000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr5:147027000-147031200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:147027400-147038200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr5:147028400-147030400 Weak transcription Small Intestine intestine
37 chr5:147028600-147031800 Weak transcription Primary hematopoietic stem cells blood
38 chr5:147028600-147032600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr5:147028600-147038200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr5:147028600-147038200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr5:147029000-147037600 Weak transcription H1 Cell Line embryonic stem cell
42 chr5:147029800-147038600 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr5:147030000-147032600 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr5:147030000-147036400 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr5:147030200-147032600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr5:147030200-147037600 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr5:147030200-147037600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015