Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12591520	1.00[EUR][1000 genomes]
rs1377061	1.00[EUR][1000 genomes]
rs1452382	1.00[EUR][1000 genomes]
rs2218948	1.00[EUR][1000 genomes]
rs28391683	1.00[EUR][1000 genomes]
rs28485441	1.00[EUR][1000 genomes]
rs28529448	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28628284	1.00[EUR][1000 genomes]
rs28668116	1.00[EUR][1000 genomes]
rs28690581	1.00[EUR][1000 genomes]
rs4494490	1.00[EUR][1000 genomes]
rs7162560	1.00[EUR][1000 genomes]
rs7167874	1.00[EUR][1000 genomes]
rs7168985	1.00[EUR][1000 genomes]
rs7175814	1.00[EUR][1000 genomes]
rs7182126	1.00[EUR][1000 genomes]
rs7182293	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74023576	1.00[AMR][1000 genomes]
rs74023579	1.00[EUR][1000 genomes]
rs8025620	1.00[AMR][1000 genomes]
rs8036034	1.00[EUR][1000 genomes]
rs8036108	1.00[EUR][1000 genomes]
rs8037690	1.00[EUR][1000 genomes]
rs8039058	1.00[AMR][1000 genomes]
rs8042459	1.00[EUR][1000 genomes]
rs921538	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74149600-74158600	Weak transcription	Right Atrium	heart
2	chr15:74152000-74158400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr15:74154800-74167000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr15:74155000-74158000	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr15:74155000-74158200	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr15:74155000-74159000	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr15:74155000-74159000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr15:74155000-74159000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr15:74155000-74159400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr15:74155000-74159600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr15:74155200-74159000	Weak transcription	iPS-18 Cell Line	embryonic stem cell

Quick Search: