Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:67348498..67350419-chr17:67353401..67355249,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs28678617	1.00[EUR][1000 genomes]
rs55987469	1.00[EUR][1000 genomes]
rs59236807	1.00[EUR][1000 genomes]
rs60034644	1.00[EUR][1000 genomes]
rs60545999	1.00[EUR][1000 genomes]
rs60997207	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61673269	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6501325	1.00[EUR][1000 genomes]
rs7207318	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7208773	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7217016	1.00[EUR][1000 genomes]
rs7223220	1.00[EUR][1000 genomes]
rs7224786	0.82[AFR][1000 genomes]
rs7226269	1.00[EUR][1000 genomes]
rs73363579	1.00[EUR][1000 genomes]
rs73363593	1.00[EUR][1000 genomes]
rs73363596	1.00[EUR][1000 genomes]
rs73363598	1.00[EUR][1000 genomes]
rs73998235	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73998239	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73998240	1.00[EUR][1000 genomes]
rs73998241	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73998244	1.00[EUR][1000 genomes]
rs73998255	1.00[EUR][1000 genomes]
rs73998270	1.00[EUR][1000 genomes]
rs73998272	1.00[EUR][1000 genomes]
rs8076188	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833527	chr17:67240575-67400871	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	esv3517126	chr17:67343157-67349955	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	nsv522420	chr17:67345358-67357573	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:67339400-67355200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr17:67347400-67352800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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