Variant report

Variant rs7247280
Chromosome Location chr19:53321445-53321446
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53296200-53324000 Weak transcription Fetal Brain Male brain
2 chr19:53306000-53324000 Weak transcription Colon Smooth Muscle Colon
3 chr19:53306600-53324000 Weak transcription Psoas Muscle Psoas
4 chr19:53308200-53324000 Weak transcription Fetal Kidney kidney
5 chr19:53311000-53323600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr19:53311400-53323600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr19:53311400-53324000 Weak transcription NHDF-Ad bronchial
8 chr19:53313600-53324000 Weak transcription Fetal Lung lung
9 chr19:53313600-53324000 Weak transcription Right Ventricle heart
10 chr19:53313600-53324200 Weak transcription Brain Substantia Nigra brain
11 chr19:53313800-53323600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr19:53313800-53323800 Weak transcription Stomach Mucosa stomach
13 chr19:53313800-53324000 Weak transcription Brain Angular Gyrus brain
14 chr19:53313800-53324000 Weak transcription Brain Cingulate Gyrus brain
15 chr19:53313800-53324000 Weak transcription HSMM muscle
16 chr19:53313800-53324000 Weak transcription NHLF lung
17 chr19:53313800-53324200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr19:53314000-53323600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr19:53314000-53323600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr19:53314000-53323600 Weak transcription K562 blood
21 chr19:53314000-53323800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr19:53314000-53323800 Weak transcription Brain Germinal Matrix brain
23 chr19:53314000-53323800 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr19:53314000-53323800 Weak transcription Small Intestine intestine
25 chr19:53314000-53324000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr19:53314000-53324000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr19:53314000-53324000 Weak transcription Fetal Brain Female brain
28 chr19:53314000-53324200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr19:53314000-53324200 Weak transcription Aorta Aorta
30 chr19:53316400-53321800 Strong transcription Primary T helper naive cells fromperipheralblood blood
31 chr19:53316400-53321800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr19:53316600-53321600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr19:53316600-53321600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr19:53316600-53321800 Strong transcription Dnd41 blood
35 chr19:53316600-53322000 Strong transcription Fetal Stomach stomach
36 chr19:53316600-53322200 ZNF genes & repeats Fetal Intestine Small intestine
37 chr19:53316800-53321800 Strong transcription Primary T helper cells PMA-I stimulated --
38 chr19:53317000-53321600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr19:53317000-53321600 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr19:53317000-53321800 Strong transcription Primary T cells fromperipheralblood blood
41 chr19:53317200-53321600 Strong transcription Fetal Muscle Trunk muscle
42 chr19:53317600-53321600 Strong transcription Duodenum Smooth Muscle Duodenum
43 chr19:53318200-53321600 Strong transcription Primary T cells from cord blood blood
44 chr19:53318200-53322200 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr19:53318800-53321800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
46 chr19:53319000-53321600 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr19:53319000-53322000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr19:53319200-53321600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr19:53319200-53324000 Weak transcription Osteobl bone
50 chr19:53319600-53323600 Weak transcription Gastric stomach

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