Variant report

Variant rs7249642
Chromosome Location chr19:53229917-53229918
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53210400-53236600 Weak transcription Psoas Muscle Psoas
2 chr19:53210600-53237200 Weak transcription NHDF-Ad bronchial
3 chr19:53212400-53231000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr19:53214800-53237200 Weak transcription Stomach Mucosa stomach
5 chr19:53215800-53237000 Weak transcription Brain Angular Gyrus brain
6 chr19:53216000-53230000 Weak transcription HSMM muscle
7 chr19:53216400-53230800 Weak transcription Colon Smooth Muscle Colon
8 chr19:53216600-53230600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr19:53216800-53236600 Weak transcription Brain Cingulate Gyrus brain
10 chr19:53217400-53230200 Weak transcription Small Intestine intestine
11 chr19:53218800-53230000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr19:53219600-53230000 Weak transcription Primary B cells from cord blood blood
13 chr19:53220600-53231400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
14 chr19:53221000-53237400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr19:53223400-53232200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
16 chr19:53224000-53232400 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr19:53224400-53230000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr19:53225000-53236800 Weak transcription Brain Hippocampus Middle brain
19 chr19:53225200-53230000 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr19:53225200-53230600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr19:53225200-53230600 Weak transcription Fetal Lung lung
22 chr19:53225200-53232400 Strong transcription Primary T cells fromperipheralblood blood
23 chr19:53225200-53236600 Weak transcription Brain Inferior Temporal Lobe brain
24 chr19:53225200-53237000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr19:53225200-53237200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr19:53225200-53237200 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr19:53225400-53230000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr19:53225400-53230600 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr19:53225400-53231200 Weak transcription Rectal Smooth Muscle rectum
30 chr19:53225400-53233400 Strong transcription Primary B cells from peripheral blood blood
31 chr19:53225400-53236600 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr19:53225400-53237200 Weak transcription H9 Cell Line embryonic stem cell
33 chr19:53226000-53232800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr19:53226200-53230000 Weak transcription Muscle Satellite Cultured Cells --
35 chr19:53226200-53231800 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr19:53226200-53231800 Strong transcription Primary T cells from cord blood blood
37 chr19:53226200-53231800 Strong transcription Thymus Thymus
38 chr19:53226200-53232000 Strong transcription Fetal Muscle Leg muscle
39 chr19:53226200-53232200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr19:53226200-53237200 Weak transcription HUVEC blood vessel
41 chr19:53226200-53237200 Weak transcription Osteobl bone
42 chr19:53226400-53230400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr19:53226400-53230800 Weak transcription NHEK skin
44 chr19:53226400-53231400 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr19:53226400-53237200 Weak transcription HMEC breast
46 chr19:53226600-53232000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr19:53226600-53232200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr19:53226600-53233200 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr19:53226800-53230200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr19:53226800-53231400 Strong transcription Fetal Thymus thymus

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