Variant report

Variant rs7257622
Chromosome Location chr19:53224932-53224933
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53206600-53227200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:53209400-53225800 Weak transcription Hela-S3 cervix
3 chr19:53210200-53227000 Weak transcription Fetal Heart heart
4 chr19:53210400-53225200 Weak transcription HMEC breast
5 chr19:53210400-53236600 Weak transcription Psoas Muscle Psoas
6 chr19:53210600-53237200 Weak transcription NHDF-Ad bronchial
7 chr19:53212200-53227000 Strong transcription Fetal Stomach stomach
8 chr19:53212400-53231000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr19:53212600-53226800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr19:53214800-53237200 Weak transcription Stomach Mucosa stomach
11 chr19:53215600-53225000 Weak transcription Fetal Kidney kidney
12 chr19:53215800-53237000 Weak transcription Brain Angular Gyrus brain
13 chr19:53216000-53230000 Weak transcription HSMM muscle
14 chr19:53216400-53230800 Weak transcription Colon Smooth Muscle Colon
15 chr19:53216600-53228200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr19:53216600-53228600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr19:53216600-53230600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr19:53216800-53236600 Weak transcription Brain Cingulate Gyrus brain
19 chr19:53217400-53228000 Weak transcription Aorta Aorta
20 chr19:53217400-53230200 Weak transcription Small Intestine intestine
21 chr19:53217600-53229800 Weak transcription Brain Substantia Nigra brain
22 chr19:53218800-53225400 Weak transcription Osteobl bone
23 chr19:53218800-53226200 Weak transcription Primary T cells from cord blood blood
24 chr19:53218800-53226800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr19:53218800-53226800 Weak transcription A549 lung
26 chr19:53218800-53228600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr19:53218800-53230000 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr19:53219000-53227200 Weak transcription Placenta Amnion Placenta Amnion
29 chr19:53219000-53228400 Weak transcription HSMMtube muscle
30 chr19:53219200-53228600 Weak transcription Stomach Smooth Muscle stomach
31 chr19:53219600-53225200 Weak transcription HUVEC blood vessel
32 chr19:53219600-53230000 Weak transcription Primary B cells from cord blood blood
33 chr19:53220000-53225000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr19:53220000-53225200 Weak transcription NHEK skin
35 chr19:53220600-53231400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
36 chr19:53221000-53237400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr19:53221400-53225400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr19:53221400-53225400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
39 chr19:53221800-53225200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:53222000-53225000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr19:53222000-53225400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr19:53222000-53225400 ZNF genes & repeats Fetal Intestine Large intestine
43 chr19:53222200-53225200 ZNF genes & repeats Lung lung
44 chr19:53222200-53227200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr19:53222400-53226000 Weak transcription K562 blood
46 chr19:53222600-53225600 ZNF genes & repeats Fetal Intestine Small intestine
47 chr19:53222800-53225400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr19:53223000-53225400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
49 chr19:53223000-53225400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
50 chr19:53223200-53225000 Strong transcription Fetal Muscle Leg muscle

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