The 2.0 version of rSNPBase

Variant report

Variant rs72682697
Chromosome Location chr8:110348649-110348650
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:110347000-110358200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr8:110347000-110358400 Weak transcription Spleen Spleen
3 chr8:110347000-110358800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr8:110347200-110354800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr8:110347200-110355000 Weak transcription Lung lung
6 chr8:110347200-110357600 Weak transcription Pancreas Pancrea
7 chr8:110347200-110358200 Weak transcription Esophagus oesophagus
8 chr8:110347200-110359800 Weak transcription Gastric stomach
9 chr8:110347400-110349200 Enhancers Primary T helper naive cells from peripheral blood blood
10 chr8:110347400-110349200 Weak transcription Left Ventricle heart
11 chr8:110347400-110349400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr8:110347400-110349800 Enhancers Primary T helper naive cells fromperipheralblood blood
13 chr8:110347400-110350000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr8:110347400-110351200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr8:110347400-110356200 Weak transcription Ovary ovary
16 chr8:110347400-110358000 Weak transcription Colonic Mucosa Colon
17 chr8:110347400-110358400 Weak transcription Fetal Brain Male brain
18 chr8:110347400-110359400 Weak transcription Aorta Aorta
19 chr8:110347400-110359400 Weak transcription Brain Substantia Nigra brain
20 chr8:110347400-110360000 Weak transcription Stomach Mucosa stomach
21 chr8:110347600-110348800 Enhancers Primary T helper cells fromperipheralblood blood
22 chr8:110347600-110348800 Enhancers Cortex derived primary cultured neurospheres brain
23 chr8:110347600-110348800 Enhancers Hela-S3 cervix
24 chr8:110347600-110348800 Weak transcription NHLF lung
25 chr8:110347600-110349000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr8:110347600-110349000 Enhancers Rectal Mucosa Donor 29 rectum
27 chr8:110347600-110349400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr8:110347600-110349800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr8:110347600-110350000 Weak transcription H1 Cell Line embryonic stem cell
30 chr8:110347600-110350200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr8:110347600-110350400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr8:110347600-110354800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr8:110347600-110354800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr8:110347600-110356000 Weak transcription Placenta Amnion Placenta Amnion
35 chr8:110347600-110357800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr8:110347600-110358200 Weak transcription H9 Cell Line embryonic stem cell
37 chr8:110347600-110358200 Weak transcription HSMMtube muscle
38 chr8:110347600-110358400 Weak transcription Fetal Stomach stomach
39 chr8:110348000-110348800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr8:110348000-110348800 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr8:110348000-110348800 Enhancers Pancreatic Islets Pancreatic Islet
42 chr8:110348000-110349000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr8:110348000-110349200 Genic enhancers Breast Myoepithelial Primary Cells Breast
44 chr8:110348000-110349200 Enhancers Brain Cingulate Gyrus brain
45 chr8:110348000-110349200 Genic enhancers Rectal Smooth Muscle rectum
46 chr8:110348000-110349200 Genic enhancers HUVEC blood vessel
47 chr8:110348000-110349400 Genic enhancers Primary monocytes fromperipheralblood blood
48 chr8:110348000-110349600 Weak transcription Thymus Thymus
49 chr8:110348000-110350800 Weak transcription Psoas Muscle Psoas
50 chr8:110348000-110351000 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015