Variant report

Variant	rs72684719
Chromosome Location	chr8:110392546-110392547
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:110391499..110394340-chr8:110396610..110400316,3	K562	blood:
2	chr8:110392136..110393759-chr8:110551713..110554181,2	K562	blood:
3	chr8:110388617..110395072-chr8:110396032..110405839,11	K562	blood:

Variant related genes	Relation type
ENSG00000147654	Chromatin interaction

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10093885	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10100944	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10108704	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11778756	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11784792	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11785973	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13438836	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1563581	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17368044	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17375750	0.85[EUR][1000 genomes]
rs17445342	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17446406	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1892761	0.81[EUR][1000 genomes]
rs28463252	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs28491535	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55800074	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55959787	0.81[EUR][1000 genomes]
rs56109503	0.84[EUR][1000 genomes]
rs56379526	0.84[EUR][1000 genomes]
rs59237049	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60189528	1.00[ASN][1000 genomes]
rs61467163	1.00[ASN][1000 genomes]
rs6469255	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6982826	0.96[EUR][1000 genomes]
rs6995033	0.85[EUR][1000 genomes]
rs6999170	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7008687	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72669109	0.84[EUR][1000 genomes]
rs72669111	0.84[EUR][1000 genomes]
rs72669122	0.82[EUR][1000 genomes]
rs72669124	0.82[EUR][1000 genomes]
rs72669127	0.82[EUR][1000 genomes]
rs72669129	0.81[EUR][1000 genomes]
rs72669131	0.81[EUR][1000 genomes]
rs72682697	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72684799	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72687010	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72687015	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7816624	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7817639	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7818929	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7820734	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7835131	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7836433	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9656791	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9656881	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891273	chr8:110219735-110475874	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv891279	chr8:110268104-110450092	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
3	nsv891280	chr8:110346363-110465481	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv972244	chr8:110389671-110400955	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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