Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1426099	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17084375	0.94[AFR][1000 genomes]
rs55660342	0.90[ASN][1000 genomes]
rs55682625	1.00[EUR][1000 genomes]
rs56281733	1.00[EUR][1000 genomes]
rs56386135	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs66789646	1.00[EUR][1000 genomes]
rs66816988	1.00[EUR][1000 genomes]
rs66995620	0.93[ASN][1000 genomes]
rs67223139	1.00[EUR][1000 genomes]
rs67482451	1.00[EUR][1000 genomes]
rs72777358	0.97[EUR][1000 genomes]
rs72777361	1.00[EUR][1000 genomes]
rs72777365	1.00[EUR][1000 genomes]
rs72777369	1.00[EUR][1000 genomes]
rs72777390	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72777399	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72777400	0.93[ASN][1000 genomes]
rs72777401	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72779403	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72779406	0.90[EUR][1000 genomes]
rs72779407	0.90[EUR][1000 genomes]
rs72779408	0.90[EUR][1000 genomes]
rs72779410	0.88[EUR][1000 genomes]
rs72779411	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756469	chr5:94323268-94400017	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94349000-94377800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr5:94369400-94378200	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr5:94372800-94377600	Weak transcription	Stomach Mucosa	stomach
4	chr5:94372800-94379000	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr5:94374800-94378600	Weak transcription	Primary hematopoietic stem cells	blood
6	chr5:94375000-94378400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr5:94375200-94377800	Weak transcription	HUVEC	blood vessel
8	chr5:94376200-94405800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr5:94376600-94378200	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr5:94376600-94378400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr5:94376600-94378600	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr5:94376600-94379000	Weak transcription	Primary T cells from cord blood	blood

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