Variant report

Variant	rs72858588
Chromosome Location	chr4:77166938-77166939
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs57389468	1.00[AMR][1000 genomes]
rs58041283	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58343507	1.00[AMR][1000 genomes]
rs60983927	1.00[AMR][1000 genomes]
rs61494828	1.00[AMR][1000 genomes]
rs72858504	1.00[AMR][1000 genomes]
rs72858514	1.00[AMR][1000 genomes]
rs72858534	1.00[AMR][1000 genomes]
rs72858537	1.00[AMR][1000 genomes]
rs72858539	1.00[AMR][1000 genomes]
rs72858541	1.00[AMR][1000 genomes]
rs72858543	1.00[AMR][1000 genomes]
rs72858544	1.00[AMR][1000 genomes]
rs72858547	1.00[AMR][1000 genomes]
rs72858548	1.00[AMR][1000 genomes]
rs72858559	1.00[AMR][1000 genomes]
rs72858560	1.00[AMR][1000 genomes]
rs72858564	1.00[AMR][1000 genomes]
rs72858565	1.00[AMR][1000 genomes]
rs72858567	1.00[AMR][1000 genomes]
rs72858568	1.00[AMR][1000 genomes]
rs72858572	1.00[AMR][1000 genomes]
rs72858576	1.00[AMR][1000 genomes]
rs72858580	1.00[AMR][1000 genomes]
rs72858584	1.00[AMR][1000 genomes]
rs72858586	1.00[AMR][1000 genomes]
rs72858593	1.00[AMR][1000 genomes]
rs72858595	1.00[AMR][1000 genomes]
rs72862952	1.00[AMR][1000 genomes]
rs72862990	1.00[AMR][1000 genomes]
rs72864608	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760851	chr4:77164549-77185144	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:77166200-77167600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr4:77166400-77167000	Enhancers	Psoas Muscle	Psoas
3	chr4:77166600-77167000	Enhancers	Brain Angular Gyrus	brain
4	chr4:77166800-77167600	Enhancers	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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