Variant report

Variant	rs72901891
Chromosome Location	chr2:185633794-185633795
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 85 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:83)

rs_ID	r²[population]
rs10497657	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10497659	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10497660	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10497662	0.88[EUR][1000 genomes]
rs11883625	1.00[AFR][1000 genomes]
rs1366843	0.91[EUR][1000 genomes]
rs17430628	1.00[ASN][1000 genomes]
rs17431153	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17431603	0.91[EUR][1000 genomes]
rs17431776	0.89[EUR][1000 genomes]
rs17431804	0.85[EUR][1000 genomes]
rs17508623	1.00[ASN][1000 genomes]
rs17508706	1.00[ASN][1000 genomes]
rs17509517	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17509873	0.89[EUR][1000 genomes]
rs1820847	0.91[EUR][1000 genomes]
rs35676856	0.89[EUR][1000 genomes]
rs4618009	0.99[AFR][1000 genomes]
rs61739290	0.89[EUR][1000 genomes]
rs722385	1.00[ASN][1000 genomes]
rs72893092	0.87[EUR][1000 genomes]
rs72893100	0.87[EUR][1000 genomes]
rs72897732	1.00[ASN][1000 genomes]
rs72897733	1.00[ASN][1000 genomes]
rs72897737	1.00[ASN][1000 genomes]
rs72897742	1.00[ASN][1000 genomes]
rs72897758	1.00[ASN][1000 genomes]
rs72897775	1.00[ASN][1000 genomes]
rs72897782	1.00[ASN][1000 genomes]
rs72897793	1.00[ASN][1000 genomes]
rs72897795	1.00[ASN][1000 genomes]
rs72897799	1.00[ASN][1000 genomes]
rs72897802	1.00[ASN][1000 genomes]
rs72899904	1.00[ASN][1000 genomes]
rs72899906	1.00[ASN][1000 genomes]
rs72899915	1.00[ASN][1000 genomes]
rs72899918	1.00[ASN][1000 genomes]
rs72899932	1.00[ASN][1000 genomes]
rs72899952	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899961	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899964	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899966	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899969	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899975	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899976	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899981	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72899983	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72899986	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901820	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901831	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901834	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901836	0.90[EUR][1000 genomes]
rs72901840	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901862	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901873	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901885	0.98[EUR][1000 genomes]
rs72901893	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72901901	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72903719	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72903720	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72903723	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72903763	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72903776	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72903778	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72903783	0.90[EUR][1000 genomes]
rs72903792	0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72903798	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72905716	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72905722	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72905730	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72905749	0.91[EUR][1000 genomes]
rs72905751	0.91[EUR][1000 genomes]
rs72905782	0.91[EUR][1000 genomes]
rs72905784	0.90[EUR][1000 genomes]
rs72905785	0.91[EUR][1000 genomes]
rs72907715	0.88[EUR][1000 genomes]
rs72907717	0.91[EUR][1000 genomes]
rs72907766	0.88[EUR][1000 genomes]
rs73978095	0.99[AFR][1000 genomes]
rs73980304	1.00[AFR][1000 genomes]
rs73980315	0.84[AFR][1000 genomes]
rs73980325	0.90[AFR][1000 genomes]
rs990844	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532412	chr2:185347334-186108701	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv834484	chr2:185550006-185762728	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:185632000-185636400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr2:185632200-185633800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr2:185632200-185634600	Enhancers	HUVEC	blood vessel
4	chr2:185633200-185634600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr2:185633200-185634600	Enhancers	Muscle Satellite Cultured Cells	--
6	chr2:185633400-185634400	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr2:185633600-185634600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr2:185633600-185634600	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr2:185633600-185635200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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