Variant report

Variant	rs72944730
Chromosome Location	chr3:50749786-50749787
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs1077215	0.95[ASN][1000 genomes]
rs12486717	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12486828	0.81[ASN][1000 genomes]
rs12487821	0.81[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12489607	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12490519	0.81[ASN][1000 genomes]
rs12491402	0.82[AFR][1000 genomes]
rs12491440	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12492093	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12492367	0.85[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12492540	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12492982	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12494326	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs12494708	0.82[AFR][1000 genomes]
rs12494776	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12495399	0.90[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs12497067	0.80[ASN][1000 genomes]
rs17051043	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17051045	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17051403	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1872184	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1894459	0.80[ASN][1000 genomes]
rs2035484	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2076927	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2170840	0.91[ASN][1000 genomes]
rs2227292	0.80[ASN][1000 genomes]
rs2227293	0.80[ASN][1000 genomes]
rs2239750	0.80[ASN][1000 genomes]
rs2239751	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2239752	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2239753	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2285090	0.80[ASN][1000 genomes]
rs3752449	0.80[ASN][1000 genomes]
rs3792323	0.85[ASN][1000 genomes]
rs4476497	0.88[ASN][1000 genomes]
rs4688695	0.81[AFR][1000 genomes]
rs4688696	0.82[AFR][1000 genomes]
rs4688705	0.91[ASN][1000 genomes]
rs4688707	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4688709	0.80[ASN][1000 genomes]
rs56844171	0.82[AFR][1000 genomes]
rs56856095	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57910827	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58356214	0.82[AFR][1000 genomes]
rs58427389	0.87[ASN][1000 genomes]
rs58529408	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59036236	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60552386	0.90[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs60602904	0.82[ASN][1000 genomes]
rs60877431	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs60917457	0.81[AFR][1000 genomes]
rs61316441	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs616689	0.87[ASN][1000 genomes]
rs61676409	0.81[ASN][1000 genomes]
rs6446208	0.91[ASN][1000 genomes]
rs650655	0.87[ASN][1000 genomes]
rs6771348	0.88[ASN][1000 genomes]
rs6783922	0.88[ASN][1000 genomes]
rs6794155	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs728902	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72942530	0.85[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs72942567	0.81[ASN][1000 genomes]
rs72942785	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72942794	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72944726	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs743753	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs745356	0.88[ASN][1000 genomes]
rs762889	0.80[ASN][1000 genomes]
rs808148	0.88[ASN][1000 genomes]
rs876103	0.90[ASN][1000 genomes]
rs876104	0.91[ASN][1000 genomes]
rs876105	0.91[ASN][1000 genomes]
rs9868889	0.88[ASN][1000 genomes]
rs9879397	0.91[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50746000-50752600	Weak transcription	Right Atrium	heart
2	chr3:50746200-50752200	Weak transcription	Brain Germinal Matrix	brain
3	chr3:50746600-50755400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr3:50746800-50752000	Weak transcription	Brain Hippocampus Middle	brain
5	chr3:50747000-50752400	Weak transcription	Brain Anterior Caudate	brain

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