Variant report

Variant	rs6794155
Chromosome Location	chr3:50702510-50702511
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:50696283..50697970-chr3:50700544..50702875,2	K562	blood:

Extended variants
information (count: 104 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:104)

rs_ID	r²[population]
rs1013233	0.86[AFR][1000 genomes]
rs1077215	1.00[ASN][1000 genomes]
rs12486143	0.84[AMR][1000 genomes]
rs12486717	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12486828	0.82[ASN][1000 genomes]
rs12487817	0.86[AMR][1000 genomes]
rs12487821	0.82[ASN][1000 genomes]
rs12489607	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12490519	0.82[ASN][1000 genomes]
rs12491440	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12491812	0.87[AMR][1000 genomes]
rs12492093	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12492367	0.82[ASN][1000 genomes]
rs12492540	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12492982	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12494326	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12494776	0.82[ASN][1000 genomes]
rs12495399	0.90[ASN][1000 genomes]
rs12496601	0.81[ASN][1000 genomes]
rs12497067	0.82[ASN][1000 genomes]
rs1385025	0.84[AFR][1000 genomes]
rs17050991	0.87[AMR][1000 genomes]
rs17050995	0.84[AMR][1000 genomes]
rs17051043	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17051045	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17051403	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1872184	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1894459	0.85[ASN][1000 genomes]
rs1971976	0.85[AFR][1000 genomes]
rs2035484	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2076927	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2170840	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2227292	0.85[ASN][1000 genomes]
rs2227293	0.85[ASN][1000 genomes]
rs2239750	0.85[ASN][1000 genomes]
rs2239751	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2239752	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2239753	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2285090	0.85[ASN][1000 genomes]
rs34848480	0.88[AFR][1000 genomes]
rs3749265	0.82[ASN][1000 genomes]
rs3752449	0.85[ASN][1000 genomes]
rs375544	0.82[AFR][1000 genomes]
rs3792323	0.90[ASN][1000 genomes]
rs3792325	0.81[AFR][1000 genomes]
rs3792328	0.82[AFR][1000 genomes]
rs3804632	0.82[AFR][1000 genomes]
rs3943212	0.85[AFR][1000 genomes]
rs396302	0.82[AFR][1000 genomes]
rs443436	0.85[AFR][1000 genomes]
rs4476497	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs448028	0.82[AFR][1000 genomes]
rs4688695	0.81[ASN][1000 genomes]
rs4688696	0.81[ASN][1000 genomes]
rs4688705	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4688707	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4688709	0.85[ASN][1000 genomes]
rs4688713	0.84[AMR][1000 genomes]
rs56170012	0.83[AMR][1000 genomes]
rs56856095	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57910827	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58427389	0.91[ASN][1000 genomes]
rs58529408	0.95[ASN][1000 genomes]
rs59036236	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60552386	0.85[ASN][1000 genomes]
rs60602904	0.84[ASN][1000 genomes]
rs60877431	0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs61193866	0.87[AMR][1000 genomes]
rs61316441	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs61557316	0.80[ASN][1000 genomes]
rs61574029	0.89[AMR][1000 genomes]
rs61613532	0.89[AMR][1000 genomes]
rs616589	0.82[AFR][1000 genomes]
rs616689	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61676409	0.82[ASN][1000 genomes]
rs6446208	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6446212	0.85[AFR][1000 genomes]
rs650655	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6766638	0.86[AMR][1000 genomes]
rs6771348	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6783922	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs728901	0.86[AFR][1000 genomes]
rs728902	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72938758	0.89[AMR][1000 genomes]
rs72942530	0.82[ASN][1000 genomes]
rs72942567	0.82[ASN][1000 genomes]
rs72942785	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72942794	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72944726	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72944730	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73835531	0.84[AMR][1000 genomes]
rs743753	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs745356	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs751851	0.88[AFR][1000 genomes]
rs762889	0.85[ASN][1000 genomes]
rs808148	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs808149	0.86[AFR][1000 genomes]
rs876103	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs876104	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs876105	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs900735	0.86[AFR][1000 genomes]
rs9682401	0.86[AFR][1000 genomes]
rs9868889	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9879397	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:50685800-50703800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr3:50687000-50712000	Weak transcription	Right Atrium	heart
3	chr3:50688200-50702600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr3:50688800-50702600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr3:50696400-50702800	Weak transcription	HSMM	muscle
6	chr3:50699800-50703600	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr3:50701000-50703200	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr3:50701000-50703800	Weak transcription	Hela-S3	cervix
9	chr3:50701000-50704400	Weak transcription	NHDF-Ad	bronchial
10	chr3:50702400-50702600	Enhancers	Osteobl	bone
11	chr3:50702400-50703000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr3:50702400-50703400	Enhancers	Spleen	Spleen
13	chr3:50702400-50705200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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