Variant report
| Variant | rs61557316 |
|---|---|
| Chromosome Location | chr3:50799340-50799341 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:46)
| rs_ID | r2[population] |
|---|---|
| rs1077215 | 1.00[EUR][1000 genomes];0.80[ASN][1000 genomes] |
| rs12485524 | 0.82[ASN][1000 genomes] |
| rs12486717 | 0.80[ASN][1000 genomes] |
| rs12486828 | 0.91[ASN][1000 genomes] |
| rs12487821 | 0.91[ASN][1000 genomes] |
| rs12488831 | 0.82[ASN][1000 genomes] |
| rs12488948 | 0.82[ASN][1000 genomes] |
| rs12490519 | 0.91[ASN][1000 genomes] |
| rs12491402 | 0.85[ASN][1000 genomes] |
| rs12492367 | 0.91[ASN][1000 genomes] |
| rs12492850 | 0.82[ASN][1000 genomes] |
| rs12494708 | 0.84[ASN][1000 genomes] |
| rs12494776 | 0.91[ASN][1000 genomes] |
| rs12495399 | 0.90[ASN][1000 genomes] |
| rs12496601 | 0.93[ASN][1000 genomes] |
| rs12497067 | 0.91[ASN][1000 genomes] |
| rs17051468 | 0.84[ASN][1000 genomes] |
| rs2125368 | 0.85[ASN][1000 genomes] |
| rs2262847 | 0.85[ASN][1000 genomes] |
| rs2355707 | 0.81[ASN][1000 genomes] |
| rs3792323 | 1.00[EUR][1000 genomes] |
| rs4078296 | 0.82[ASN][1000 genomes] |
| rs4688695 | 0.93[ASN][1000 genomes] |
| rs4688696 | 0.93[ASN][1000 genomes] |
| rs4688697 | 0.82[ASN][1000 genomes] |
| rs4688752 | 0.85[ASN][1000 genomes] |
| rs56844171 | 0.85[ASN][1000 genomes] |
| rs56856095 | 0.81[ASN][1000 genomes] |
| rs57591074 | 1.00[EUR][1000 genomes] |
| rs58356214 | 0.85[ASN][1000 genomes] |
| rs58427389 | 1.00[EUR][1000 genomes] |
| rs58529408 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs59036236 | 0.80[ASN][1000 genomes] |
| rs60552386 | 0.94[ASN][1000 genomes] |
| rs60602904 | 0.90[ASN][1000 genomes] |
| rs60917457 | 0.85[ASN][1000 genomes] |
| rs61627377 | 0.81[ASN][1000 genomes] |
| rs61676409 | 0.94[ASN][1000 genomes] |
| rs6794155 | 0.80[ASN][1000 genomes] |
| rs72937251 | 0.80[ASN][1000 genomes] |
| rs72937262 | 0.81[ASN][1000 genomes] |
| rs72937265 | 0.81[ASN][1000 genomes] |
| rs72942530 | 0.94[ASN][1000 genomes] |
| rs72942567 | 0.91[ASN][1000 genomes] |
| rs72942794 | 0.80[ASN][1000 genomes] |
| rs7427526 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:50796000-50801600 | Weak transcription | Brain Substantia Nigra | brain |
