Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11164834	1.00[EUR][1000 genomes]
rs11799875	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11800464	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12064459	1.00[EUR][1000 genomes]
rs12084062	1.00[EUR][1000 genomes]
rs12091803	1.00[EUR][1000 genomes]
rs17271666	1.00[EUR][1000 genomes]
rs35709587	1.00[EUR][1000 genomes]
rs56675391	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57115390	1.00[EUR][1000 genomes]
rs58042552	1.00[EUR][1000 genomes]
rs59504501	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60025932	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60807198	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60986131	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6700752	1.00[EUR][1000 genomes]
rs72955332	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72968072	1.00[EUR][1000 genomes]
rs72968080	1.00[EUR][1000 genomes]
rs72968097	1.00[EUR][1000 genomes]
rs72969937	1.00[EUR][1000 genomes]
rs72969957	1.00[EUR][1000 genomes]
rs72969976	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1008602	chr1:93176811-93640808	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
2	nsv830614	chr1:93465978-93678700	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
3	nsv870775	chr1:93481640-93543119	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv946092	chr1:93511551-93522478	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:93519400-93525800	Weak transcription	Dnd41	blood

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