Variant report

Variant	rs72958264
Chromosome Location	chr11:83566889-83566890
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs11233727	1.00[ASN][1000 genomes]
rs11233729	1.00[ASN][1000 genomes]
rs11233756	1.00[ASN][1000 genomes]
rs12364251	1.00[ASN][1000 genomes]
rs12786565	1.00[ASN][1000 genomes]
rs12787861	1.00[ASN][1000 genomes]
rs12792825	1.00[ASN][1000 genomes]
rs12797204	1.00[ASN][1000 genomes]
rs12802155	1.00[ASN][1000 genomes]
rs12803579	1.00[ASN][1000 genomes]
rs12806068	1.00[ASN][1000 genomes]
rs17146314	1.00[ASN][1000 genomes]
rs17481934	1.00[ASN][1000 genomes]
rs1892949	1.00[ASN][1000 genomes]
rs34514322	1.00[ASN][1000 genomes]
rs34520201	1.00[ASN][1000 genomes]
rs34718216	1.00[ASN][1000 genomes]
rs34839973	1.00[ASN][1000 genomes]
rs34843650	1.00[ASN][1000 genomes]
rs34873133	1.00[ASN][1000 genomes]
rs34994208	1.00[ASN][1000 genomes]
rs35047639	1.00[ASN][1000 genomes]
rs35248605	1.00[ASN][1000 genomes]
rs35301519	1.00[ASN][1000 genomes]
rs35627230	1.00[ASN][1000 genomes]
rs35954003	1.00[ASN][1000 genomes]
rs36110284	1.00[ASN][1000 genomes]
rs36125731	1.00[ASN][1000 genomes]
rs4456272	1.00[ASN][1000 genomes]
rs59576380	1.00[ASN][1000 genomes]
rs66848113	1.00[ASN][1000 genomes]
rs71465552	1.00[ASN][1000 genomes]
rs71465553	1.00[ASN][1000 genomes]
rs71465554	1.00[ASN][1000 genomes]
rs71465556	1.00[ASN][1000 genomes]
rs71465557	1.00[ASN][1000 genomes]
rs71465559	1.00[ASN][1000 genomes]
rs71468352	1.00[ASN][1000 genomes]
rs73515138	1.00[ASN][1000 genomes]
rs73515149	1.00[ASN][1000 genomes]
rs977822	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898017	chr11:83556067-83583324	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv898018	chr11:83556067-83586526	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv898019	chr11:83556067-83602367	ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv898020	chr11:83558738-83602367	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv898021	chr11:83562296-83602367	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv898022	chr11:83562296-83602367	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
7	nsv898023	chr11:83566115-83602367	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83565600-83567000	Weak transcription	Brain Hippocampus Middle	brain
2	chr11:83566400-83567000	ZNF genes & repeats	Brain Angular Gyrus	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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