The 2.0 version of rSNPBase

Variant report

Variant rs73092034
Chromosome Location chr5:35854549-35854550
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:35849600-35856200 Enhancers Dnd41 blood
2 chr5:35851800-35856800 Enhancers NHDF-Ad bronchial
3 chr5:35852000-35854600 Flanking Active TSS Primary T cells from cord blood blood
4 chr5:35852000-35856800 Enhancers Primary B cells from cord blood blood
5 chr5:35852200-35854600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
6 chr5:35852400-35856200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr5:35852400-35856600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr5:35852400-35859200 Weak transcription Lung lung
9 chr5:35852400-35862800 Enhancers Hela-S3 cervix
10 chr5:35852600-35855600 Weak transcription A549 lung
11 chr5:35852600-35856400 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr5:35852800-35854800 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr5:35852800-35856000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
14 chr5:35852800-35856600 Weak transcription NH-A brain
15 chr5:35852800-35857000 Weak transcription Duodenum Mucosa Duodenum
16 chr5:35853000-35855400 Weak transcription HSMMtube muscle
17 chr5:35853000-35855400 Weak transcription NHLF lung
18 chr5:35853000-35856400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr5:35853000-35856400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr5:35853000-35856600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr5:35853000-35856600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:35853000-35856800 Enhancers Muscle Satellite Cultured Cells --
23 chr5:35853000-35857000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:35853400-35855200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:35853400-35855400 Weak transcription HSMM muscle
26 chr5:35853600-35854600 Flanking Active TSS Thymus Thymus
27 chr5:35853600-35854800 Weak transcription Osteobl bone
28 chr5:35853600-35856800 Enhancers Fetal Thymus thymus
29 chr5:35853800-35854600 Flanking Active TSS Primary T cells fromperipheralblood blood
30 chr5:35853800-35855200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr5:35853800-35855400 Enhancers Primary B cells from peripheral blood blood
32 chr5:35853800-35856400 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr5:35853800-35857200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr5:35853800-35858000 Enhancers GM12878-XiMat blood
35 chr5:35854000-35855600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr5:35854200-35856400 Weak transcription Primary monocytes fromperipheralblood blood
37 chr5:35854200-35856800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr5:35854200-35857000 Enhancers NHEK skin
39 chr5:35854200-35857800 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr5:35854400-35854800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
41 chr5:35854400-35854800 Active TSS Primary T helper cells fromperipheralblood blood
42 chr5:35854400-35854800 Active TSS Primary T regulatory cells fromperipheralblood blood
43 chr5:35854400-35854800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chr5:35854400-35854800 Active TSS Primary T killer memory cells from peripheral blood blood
45 chr5:35854400-35854800 ZNF genes & repeats Right Atrium heart
46 chr5:35854400-35854800 Enhancers HMEC breast
47 chr5:35854400-35855000 Active TSS Primary T helper naive cells fromperipheralblood blood
48 chr5:35854400-35855000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
49 chr5:35854400-35855000 Active TSS Primary Natural Killer cells fromperipheralblood blood
50 chr5:35854400-35855000 Active TSS Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015