Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66753444..66756040-chr8:66799551..66802496,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000272192	Chromatin interaction
ENSG00000205268	Chromatin interaction

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs11994535	0.80[ASN][1000 genomes]
rs11995215	0.87[EUR][1000 genomes]
rs11995869	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11996963	0.81[EUR][1000 genomes]
rs34178379	0.80[ASN][1000 genomes]
rs3922725	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3922726	0.80[ASN][1000 genomes]
rs55636103	0.80[ASN][1000 genomes]
rs56200451	0.80[ASN][1000 genomes]
rs57033118	0.80[ASN][1000 genomes]
rs58122259	0.80[ASN][1000 genomes]
rs58407124	0.80[ASN][1000 genomes]
rs58681615	0.80[ASN][1000 genomes]
rs59321109	0.80[ASN][1000 genomes]
rs59342909	1.00[ASN][1000 genomes]
rs59436889	0.80[ASN][1000 genomes]
rs59587921	1.00[ASN][1000 genomes]
rs60107801	1.00[ASN][1000 genomes]
rs60109751	0.80[ASN][1000 genomes]
rs61492394	0.80[ASN][1000 genomes]
rs6980631	0.80[ASN][1000 genomes]
rs6999945	0.80[ASN][1000 genomes]
rs7006472	0.80[ASN][1000 genomes]
rs7010977	0.80[ASN][1000 genomes]
rs7011003	0.80[ASN][1000 genomes]
rs7014758	0.80[ASN][1000 genomes]
rs73242974	0.81[EUR][1000 genomes]
rs73242990	0.81[EUR][1000 genomes]
rs73247098	0.80[ASN][1000 genomes]
rs73248906	0.80[ASN][1000 genomes]
rs73248909	0.80[ASN][1000 genomes]
rs73248984	0.80[ASN][1000 genomes]
rs7463507	0.80[ASN][1000 genomes]
rs7463565	0.95[ASN][1000 genomes]
rs7814441	0.80[ASN][1000 genomes]
rs7824102	1.00[ASN][1000 genomes]
rs7833724	0.80[ASN][1000 genomes]
rs9694791	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv1023239	chr8:66775321-66904124	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66792400-66801000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr8:66799000-66802200	Enhancers	Primary B cells from peripheral blood	blood
3	chr8:66799800-66801000	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr8:66799800-66801000	Enhancers	Fetal Intestine Small	intestine
5	chr8:66799800-66801000	Enhancers	Small Intestine	intestine
6	chr8:66800000-66800800	Weak transcription	Primary T cells from cord blood	blood
7	chr8:66800200-66801000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr8:66800400-66801200	Enhancers	Stomach Mucosa	stomach
9	chr8:66800400-66801600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr8:66800400-66802000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
11	chr8:66800400-66802000	Enhancers	Duodenum Mucosa	Duodenum
12	chr8:66800600-66800800	Enhancers	Primary B cells from cord blood	blood

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