The 2.0 version of rSNPBase

Variant report

Variant rs73452711
Chromosome Location chr9:72827485-72827486
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72793000-72842600 Weak transcription Rectal Smooth Muscle rectum
2 chr9:72809600-72837800 Weak transcription NH-A brain
3 chr9:72810800-72827800 Weak transcription Colon Smooth Muscle Colon
4 chr9:72820800-72835400 Weak transcription Placenta Amnion Placenta Amnion
5 chr9:72821200-72828200 Weak transcription HSMMtube muscle
6 chr9:72821200-72844800 Weak transcription HMEC breast
7 chr9:72821400-72827600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr9:72821400-72829800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr9:72821400-72830200 Weak transcription Stomach Smooth Muscle stomach
10 chr9:72821400-72832000 Weak transcription NHEK skin
11 chr9:72825600-72833200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr9:72826000-72827800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr9:72826000-72833200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr9:72826800-72827800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr9:72827000-72827800 ZNF genes & repeats Lung lung
16 chr9:72827000-72828000 ZNF genes & repeats Fetal Stomach stomach
17 chr9:72827000-72828200 ZNF genes & repeats Aorta Aorta
18 chr9:72827000-72828800 ZNF genes & repeats Fetal Muscle Leg muscle
19 chr9:72827200-72827600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr9:72827200-72828000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
21 chr9:72827200-72828000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
22 chr9:72827200-72828000 ZNF genes & repeats Left Ventricle heart
23 chr9:72827200-72828000 ZNF genes & repeats Pancreas Pancrea
24 chr9:72827200-72828200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr9:72827200-72828200 ZNF genes & repeats Liver Liver
26 chr9:72827200-72828200 ZNF genes & repeats Duodenum Mucosa Duodenum
27 chr9:72827200-72828200 ZNF genes & repeats Fetal Lung lung
28 chr9:72827200-72828400 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
29 chr9:72827200-72828800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
30 chr9:72827200-72830800 Strong transcription Muscle Satellite Cultured Cells --
31 chr9:72827200-72832000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr9:72827400-72827600 Weak transcription HepG2 liver
33 chr9:72827400-72827800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr9:72827400-72828000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr9:72827400-72828000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
36 chr9:72827400-72828000 ZNF genes & repeats Gastric stomach
37 chr9:72827400-72828000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
38 chr9:72827400-72828000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
39 chr9:72827400-72828200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr9:72827400-72828200 ZNF genes & repeats Adipose Nuclei Adipose
41 chr9:72827400-72828600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
42 chr9:72827400-72829000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr9:72827400-72829400 Strong transcription HSMM muscle
44 chr9:72827400-72830200 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015