The 2.0 version of rSNPBase

Variant report

Variant rs73452717
Chromosome Location chr9:72829479-72829480
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72793000-72842600 Weak transcription Rectal Smooth Muscle rectum
2 chr9:72809600-72837800 Weak transcription NH-A brain
3 chr9:72820800-72835400 Weak transcription Placenta Amnion Placenta Amnion
4 chr9:72821200-72844800 Weak transcription HMEC breast
5 chr9:72821400-72829800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr9:72821400-72830200 Weak transcription Stomach Smooth Muscle stomach
7 chr9:72821400-72832000 Weak transcription NHEK skin
8 chr9:72825600-72833200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr9:72826000-72833200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr9:72827200-72830800 Strong transcription Muscle Satellite Cultured Cells --
11 chr9:72827200-72832000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr9:72827400-72830200 Weak transcription Colonic Mucosa Colon
13 chr9:72827600-72833800 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr9:72827600-72834000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr9:72827600-72843200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr9:72827800-72833200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:72827800-72833400 Weak transcription Osteobl bone
18 chr9:72827800-72841600 Weak transcription Placenta Placenta
19 chr9:72828000-72830200 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr9:72828000-72832000 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr9:72828000-72833200 Weak transcription Fetal Stomach stomach
22 chr9:72828000-72833200 Weak transcription Left Ventricle heart
23 chr9:72828000-72833400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr9:72828000-72836600 Weak transcription Right Ventricle heart
25 chr9:72828000-72837000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr9:72828000-72844000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr9:72828000-72858800 Weak transcription Gastric stomach
28 chr9:72828200-72831400 Strong transcription HSMMtube muscle
29 chr9:72828200-72831600 Strong transcription Liver Liver
30 chr9:72828200-72833200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr9:72828200-72833400 Weak transcription Fetal Kidney kidney
32 chr9:72828200-72835400 Weak transcription Adipose Nuclei Adipose
33 chr9:72828200-72835400 Weak transcription Small Intestine intestine
34 chr9:72828200-72843200 Weak transcription Fetal Lung lung
35 chr9:72828200-72844000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr9:72828400-72830800 Weak transcription Brain Hippocampus Middle brain
37 chr9:72828400-72830800 Strong transcription Duodenum Mucosa Duodenum
38 chr9:72828400-72831400 Weak transcription HepG2 liver
39 chr9:72828400-72831600 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr9:72828600-72829600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr9:72828600-72830200 Strong transcription Pancreas Pancrea
42 chr9:72828600-72837200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr9:72828600-72843000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr9:72828800-72830800 Strong transcription Ovary ovary
45 chr9:72828800-72831000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr9:72828800-72831600 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr9:72829000-72830200 ZNF genes & repeats Fetal Muscle Leg muscle
48 chr9:72829000-72831000 Weak transcription Esophagus oesophagus
49 chr9:72829000-72831600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr9:72829000-72841800 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015