Variant report

Variant	rs73463928
Chromosome Location	chr6:69434807-69434808
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:69432642..69436384-chr6:69440400..69444068,5	K562	blood:

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs55792962	0.88[EUR][1000 genomes]
rs55840344	0.88[EUR][1000 genomes]
rs55867330	0.88[EUR][1000 genomes]
rs55915457	0.88[EUR][1000 genomes]
rs56075259	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs56236762	0.88[EUR][1000 genomes]
rs56399771	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs56998424	0.88[EUR][1000 genomes]
rs58108540	0.88[EUR][1000 genomes]
rs58548626	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs59009249	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs59310513	0.88[EUR][1000 genomes]
rs59384052	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs59877292	0.88[EUR][1000 genomes]
rs60607705	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs60761802	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs60892917	0.88[EUR][1000 genomes]
rs60923857	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6910603	0.88[EUR][1000 genomes]
rs73461967	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73461968	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73461970	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73461971	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73461975	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73461977	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73461979	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73461996	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73462002	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463903	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463905	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463911	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463915	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463917	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463925	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73463932	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73463934	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463935	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463941	0.82[EUR][1000 genomes]
rs73463946	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73463952	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73467839	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73467848	0.88[EUR][1000 genomes]
rs73467883	0.88[EUR][1000 genomes]
rs73467884	0.88[EUR][1000 genomes]
rs73745828	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73745858	0.88[EUR][1000 genomes]
rs73745859	0.88[EUR][1000 genomes]
rs73745860	0.88[EUR][1000 genomes]
rs73745861	0.88[EUR][1000 genomes]
rs73745863	0.88[EUR][1000 genomes]
rs73745866	0.88[EUR][1000 genomes]
rs73745867	0.88[EUR][1000 genomes]
rs73745870	0.88[EUR][1000 genomes]
rs73745876	0.88[EUR][1000 genomes]
rs73745879	0.88[EUR][1000 genomes]
rs73745880	0.88[EUR][1000 genomes]
rs73745881	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69421400-69436400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr6:69428800-69435000	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr6:69429000-69435400	Weak transcription	Brain Angular Gyrus	brain
4	chr6:69429000-69435400	Weak transcription	Fetal Brain Female	brain
5	chr6:69429200-69435400	Weak transcription	Fetal Brain Male	brain
6	chr6:69432800-69437000	Enhancers	Fetal Lung	lung
7	chr6:69434400-69435400	Weak transcription	NHDF-Ad	bronchial
8	chr6:69434800-69435000	Enhancers	K562	blood
9	chr6:69434800-69436000	Weak transcription	Fetal Heart	heart

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