Variant report

Variant	rs73470550
Chromosome Location	chr11:57034521-57034522
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs56043520	1.00[EUR][1000 genomes]
rs56291203	1.00[EUR][1000 genomes]
rs56332254	1.00[EUR][1000 genomes]
rs56410703	1.00[EUR][1000 genomes]
rs56808298	1.00[EUR][1000 genomes]
rs56825823	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57437126	1.00[EUR][1000 genomes]
rs57500725	1.00[EUR][1000 genomes]
rs57570811	1.00[EUR][1000 genomes]
rs57590159	0.90[AFR][1000 genomes]
rs58810319	1.00[EUR][1000 genomes]
rs59231801	1.00[EUR][1000 genomes]
rs59267531	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60196378	1.00[EUR][1000 genomes]
rs60651361	1.00[EUR][1000 genomes]
rs61427216	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs675913	1.00[EUR][1000 genomes]
rs7103566	1.00[EUR][1000 genomes]
rs7124204	1.00[EUR][1000 genomes]
rs7125852	1.00[EUR][1000 genomes]
rs73468618	1.00[EUR][1000 genomes]
rs73468621	1.00[EUR][1000 genomes]
rs73468629	1.00[EUR][1000 genomes]
rs73468634	1.00[EUR][1000 genomes]
rs73468648	1.00[EUR][1000 genomes]
rs73468666	1.00[EUR][1000 genomes]
rs73468671	1.00[EUR][1000 genomes]
rs73468672	1.00[EUR][1000 genomes]
rs73468675	1.00[EUR][1000 genomes]
rs73468679	1.00[EUR][1000 genomes]
rs73468680	1.00[EUR][1000 genomes]
rs73470503	1.00[EUR][1000 genomes]
rs73470586	0.90[AFR][1000 genomes]
rs7946444	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915640	chr11:56814841-57139786	Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:57030600-57036800	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr11:57031000-57037200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links