Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1037089	0.82[ASN][1000 genomes]
rs11226850	1.00[ASN][1000 genomes]
rs1445608	0.82[ASN][1000 genomes]
rs17104532	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104549	1.00[ASN][1000 genomes]
rs17104577	0.83[ASN][1000 genomes]
rs17104583	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17104598	0.83[ASN][1000 genomes]
rs1838666	0.82[ASN][1000 genomes]
rs1942968	0.82[ASN][1000 genomes]
rs1942969	0.82[ASN][1000 genomes]
rs1942970	0.82[ASN][1000 genomes]
rs2121062	0.89[ASN][1000 genomes]
rs561015	0.89[ASN][1000 genomes]
rs58674482	1.00[ASN][1000 genomes]
rs58685674	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59209066	0.93[ASN][1000 genomes]
rs61476171	1.00[ASN][1000 genomes]
rs635980	0.89[ASN][1000 genomes]
rs6591140	0.82[ASN][1000 genomes]
rs667713	0.89[ASN][1000 genomes]
rs7108004	1.00[ASN][1000 genomes]
rs7119216	1.00[ASN][1000 genomes]
rs7124769	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7130919	0.82[ASN][1000 genomes]
rs73540343	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73540344	1.00[ASN][1000 genomes]
rs73540347	1.00[ASN][1000 genomes]
rs73554208	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7942635	0.89[ASN][1000 genomes]
rs7947803	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832256	chr11:105516593-105689326	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv1829261	chr11:105614894-105698982	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv898357	chr11:105614894-105709856	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105634600-105653800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr11:105638800-105651600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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