Variant report

Variant	rs59209066
Chromosome Location	chr11:105613556-105613557
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1037089	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10791765	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11226850	0.93[ASN][1000 genomes]
rs11820104	1.00[AMR][1000 genomes]
rs11826985	1.00[AMR][1000 genomes]
rs1348676	0.80[ASN][1000 genomes]
rs1445608	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1445616	1.00[EUR][1000 genomes]
rs17104532	0.93[ASN][1000 genomes]
rs17104549	0.93[ASN][1000 genomes]
rs17104599	1.00[AMR][1000 genomes]
rs1822988	1.00[EUR][1000 genomes]
rs1838666	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1942968	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1942969	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1942970	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2028817	1.00[AMR][1000 genomes]
rs2028818	1.00[AMR][1000 genomes]
rs2121062	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4755109	1.00[AMR][1000 genomes]
rs561015	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57867779	1.00[AMR][1000 genomes]
rs58674482	0.93[ASN][1000 genomes]
rs58685674	0.93[ASN][1000 genomes]
rs613114	1.00[AMR][1000 genomes]
rs61451353	1.00[AMR][1000 genomes]
rs61476171	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs635980	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6591139	1.00[EUR][1000 genomes]
rs6591140	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs667713	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7108004	0.93[ASN][1000 genomes]
rs7119216	0.93[ASN][1000 genomes]
rs7130919	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73540342	0.93[ASN][1000 genomes]
rs73540343	0.93[ASN][1000 genomes]
rs73540344	0.93[ASN][1000 genomes]
rs73540347	0.93[ASN][1000 genomes]
rs7929601	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7934957	1.00[EUR][1000 genomes]
rs7940036	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7942635	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7947803	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7948356	1.00[AMR][1000 genomes]
rs7950549	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832256	chr11:105516593-105689326	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105610800-105615200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr11:105613400-105613800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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