Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	6:132269655-132282174..6:132422197-132424174	K562	blood:

Variant related genes	Relation type
ENSG00000227220	Chromatin interaction
ENSG00000118523	Chromatin interaction

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs17060966	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17061007	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2022612	1.00[EUR][1000 genomes]
rs2327193	1.00[EUR][1000 genomes]
rs55742557	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57075525	1.00[EUR][1000 genomes]
rs58299965	1.00[EUR][1000 genomes]
rs58884491	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61085013	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6906828	1.00[EUR][1000 genomes]
rs6909873	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73543504	1.00[EUR][1000 genomes]
rs73543507	1.00[EUR][1000 genomes]
rs73543511	1.00[EUR][1000 genomes]
rs73543527	1.00[EUR][1000 genomes]
rs73543545	1.00[EUR][1000 genomes]
rs73543554	1.00[EUR][1000 genomes]
rs73543593	1.00[EUR][1000 genomes]
rs73545551	1.00[EUR][1000 genomes]
rs73545576	1.00[EUR][1000 genomes]
rs73545600	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73547580	1.00[EUR][1000 genomes]
rs73547600	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73779148	1.00[EUR][1000 genomes]
rs9321316	1.00[EUR][1000 genomes]
rs9483367	1.00[EUR][1000 genomes]
rs9483368	1.00[EUR][1000 genomes]
rs9483369	1.00[EUR][1000 genomes]
rs9493165	1.00[EUR][1000 genomes]
rs9885614	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132420600-132423600	Enhancers	Fetal Heart	heart
2	chr6:132420800-132422800	Weak transcription	Aorta	Aorta
3	chr6:132421200-132423600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr6:132421600-132422800	Enhancers	HSMMtube	muscle

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