Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:108230124..108232941-chr7:108244344..108247256,2	K562	blood:
2	chr7:108243393..108246050-chr7:108248845..108250724,2	K562	blood:
3	chr7:108209290..108211017-chr7:108244692..108246466,2	K562	blood:
4	chr7:108234971..108237051-chr7:108243040..108246034,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10215273	1.00[EUR][1000 genomes]
rs10225537	1.00[AMR][1000 genomes]
rs10233349	1.00[AMR][1000 genomes]
rs10251214	1.00[AMR][1000 genomes]
rs10264392	1.00[AMR][1000 genomes]
rs10270262	1.00[AMR][1000 genomes]
rs17156077	1.00[AMR][1000 genomes]
rs2190896	1.00[EUR][1000 genomes]
rs28534983	1.00[AMR][1000 genomes]
rs28576424	1.00[AMR][1000 genomes]
rs28584565	1.00[AMR][1000 genomes]
rs35846666	1.00[EUR][1000 genomes]
rs4140914	1.00[EUR][1000 genomes]
rs55645791	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56231121	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57881876	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60796314	1.00[AMR][1000 genomes]
rs6943408	1.00[EUR][1000 genomes]
rs73426189	1.00[EUR][1000 genomes]
rs73426193	1.00[EUR][1000 genomes]
rs73426197	1.00[EUR][1000 genomes]
rs73713110	1.00[EUR][1000 genomes]
rs73713178	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73713180	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73713181	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3348839	chr7:107377311-108286538	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
2	nsv817371	chr7:108199882-108649799	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:108240400-108245600	Weak transcription	Fetal Brain Male	brain
2	chr7:108243600-108246200	Enhancers	Placenta	Placenta
3	chr7:108244000-108245800	Enhancers	Fetal Brain Female	brain
4	chr7:108244400-108246000	Enhancers	Brain Germinal Matrix	brain
5	chr7:108244400-108247800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr7:108244800-108245600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr7:108244800-108245600	Flanking Active TSS	K562	blood

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