Variant report

Variant	rs73747843
Chromosome Location	chr6:75702306-75702307
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs13437111	1.00[EUR][1000 genomes]
rs41266763	1.00[EUR][1000 genomes]
rs41269301	1.00[EUR][1000 genomes]
rs4449593	1.00[EUR][1000 genomes]
rs510507	1.00[EUR][1000 genomes]
rs560250	1.00[EUR][1000 genomes]
rs581649	1.00[EUR][1000 genomes]
rs60256732	1.00[EUR][1000 genomes]
rs61177673	1.00[EUR][1000 genomes]
rs6931519	1.00[EUR][1000 genomes]
rs73462090	1.00[EUR][1000 genomes]
rs73747440	1.00[EUR][1000 genomes]
rs73747838	0.92[AFR][1000 genomes]
rs73747841	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7738809	1.00[EUR][1000 genomes]
rs9293988	1.00[EUR][1000 genomes]
rs9443122	1.00[EUR][1000 genomes]
rs9443125	1.00[EUR][1000 genomes]
rs9447369	1.00[EUR][1000 genomes]
rs9447372	1.00[EUR][1000 genomes]
rs9447373	1.00[EUR][1000 genomes]
rs9447383	1.00[EUR][1000 genomes]
rs9447384	1.00[EUR][1000 genomes]
rs9447387	1.00[EUR][1000 genomes]
rs9447392	1.00[EUR][1000 genomes]
rs9447393	1.00[EUR][1000 genomes]
rs9447435	1.00[EUR][1000 genomes]
rs9447440	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830696	chr6:75538316-75734609	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75700600-75702800	Enhancers	HMEC	breast
2	chr6:75701000-75703400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr6:75701200-75703000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:75701400-75702400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:75701400-75702400	Enhancers	Osteobl	bone
6	chr6:75701400-75704200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr6:75701600-75702400	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr6:75701600-75702400	Flanking Active TSS	NHEK	skin
9	chr6:75701800-75702800	Weak transcription	Fetal Brain Male	brain
10	chr6:75702000-75703000	Enhancers	Fetal Lung	lung
11	chr6:75702200-75702600	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr6:75702200-75702600	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr6:75702200-75702600	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr6:75702200-75703200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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