Variant report
| Variant | rs6931519 |
|---|---|
| Chromosome Location | chr6:75717634-75717635 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs12182052 | 0.87[AMR][1000 genomes] |
| rs13437111 | 1.00[EUR][1000 genomes] |
| rs171262 | 1.00[EUR][1000 genomes] |
| rs240372 | 1.00[EUR][1000 genomes] |
| rs240373 | 1.00[EUR][1000 genomes] |
| rs41266763 | 1.00[EUR][1000 genomes] |
| rs41269301 | 1.00[EUR][1000 genomes] |
| rs4449593 | 1.00[EUR][1000 genomes] |
| rs510507 | 1.00[EUR][1000 genomes] |
| rs560250 | 1.00[EUR][1000 genomes] |
| rs581649 | 1.00[EUR][1000 genomes] |
| rs60256732 | 1.00[EUR][1000 genomes] |
| rs61177673 | 1.00[EUR][1000 genomes] |
| rs6931559 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73462090 | 1.00[EUR][1000 genomes] |
| rs73747440 | 1.00[EUR][1000 genomes] |
| rs73747841 | 1.00[EUR][1000 genomes] |
| rs73747843 | 1.00[EUR][1000 genomes] |
| rs7738809 | 1.00[EUR][1000 genomes] |
| rs9293988 | 1.00[EUR][1000 genomes] |
| rs9293992 | 0.87[AMR][1000 genomes] |
| rs9443122 | 1.00[EUR][1000 genomes] |
| rs9443125 | 1.00[EUR][1000 genomes] |
| rs9443138 | 0.87[AMR][1000 genomes] |
| rs9447369 | 1.00[EUR][1000 genomes] |
| rs9447372 | 1.00[EUR][1000 genomes] |
| rs9447373 | 1.00[EUR][1000 genomes] |
| rs9447383 | 1.00[EUR][1000 genomes] |
| rs9447384 | 1.00[EUR][1000 genomes] |
| rs9447387 | 1.00[EUR][1000 genomes] |
| rs9447392 | 1.00[EUR][1000 genomes] |
| rs9447393 | 1.00[EUR][1000 genomes] |
| rs9447435 | 1.00[EUR][1000 genomes] |
| rs9447440 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv830696 | chr6:75538316-75734609 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
| 2 | nsv970047 | chr6:75713017-75721589 | Weak transcription Enhancers ZNF genes & repeats | n/a | n/a | inside rSNPs | n/a |
| 3 | nsv436512 | chr6:75715638-75726015 | Enhancers Weak transcription | n/a | n/a | inside rSNPs | n/a |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:75707800-75721600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
