Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:68370456..68371966-chr5:68399176..68400870,2	K562	blood:
2	chr5:68369682..68372590-chr5:68373301..68376455,3	K562	blood:
3	chr5:68339371..68341733-chr5:68369819..68371503,2	K562	blood:

Variant related genes	Relation type
ENSG00000250237	Chromatin interaction

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs16898397	1.00[EUR][1000 genomes]
rs1873431	1.00[EUR][1000 genomes]
rs56292773	1.00[EUR][1000 genomes]
rs57402724	1.00[EUR][1000 genomes]
rs57630507	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58381452	1.00[EUR][1000 genomes]
rs58742544	1.00[EUR][1000 genomes]
rs59023483	1.00[EUR][1000 genomes]
rs59618733	1.00[EUR][1000 genomes]
rs59776629	1.00[EUR][1000 genomes]
rs59868150	1.00[EUR][1000 genomes]
rs60050075	1.00[EUR][1000 genomes]
rs60121998	1.00[EUR][1000 genomes]
rs61244656	1.00[EUR][1000 genomes]
rs61600663	1.00[EUR][1000 genomes]
rs6449978	1.00[EUR][1000 genomes]
rs6449979	1.00[EUR][1000 genomes]
rs6861518	1.00[EUR][1000 genomes]
rs6876368	1.00[EUR][1000 genomes]
rs6878268	1.00[EUR][1000 genomes]
rs6883147	1.00[EUR][1000 genomes]
rs6883399	1.00[EUR][1000 genomes]
rs6893921	1.00[EUR][1000 genomes]
rs73114938	1.00[EUR][1000 genomes]
rs73114940	1.00[EUR][1000 genomes]
rs73114961	1.00[EUR][1000 genomes]
rs73114965	1.00[EUR][1000 genomes]
rs73114968	1.00[EUR][1000 genomes]
rs73114969	1.00[EUR][1000 genomes]
rs73114971	1.00[EUR][1000 genomes]
rs73775816	1.00[EUR][1000 genomes]
rs73775825	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73775842	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7712243	1.00[EUR][1000 genomes]
rs7717178	1.00[EUR][1000 genomes]
rs7717340	1.00[EUR][1000 genomes]
rs7720166	1.00[EUR][1000 genomes]
rs7725200	1.00[EUR][1000 genomes]
rs7727281	1.00[EUR][1000 genomes]
rs7735079	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv968920	chr5:68350235-68371417	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68370200-68370800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:68370400-68371000	Enhancers	Duodenum Mucosa	Duodenum
3	chr5:68370600-68370800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
4	chr5:68370600-68371200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle

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