Variant report

Variant	rs73114961
Chromosome Location	chr5:68340210-68340211
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:68339937..68342368-chr5:68462936..68465117,2	K562	blood:
2	chr5:68337727..68340697-chr5:68388577..68391488,3	MCF-7	breast:
3	chr5:68337794..68340461-chr5:68472784..68475376,2	K562	blood:

Variant related genes	Relation type
ENSG00000134057	Chromatin interaction
ENSG00000145740	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs16898243	1.00[EUR][1000 genomes]
rs16898397	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1873431	1.00[EUR][1000 genomes]
rs56292773	1.00[EUR][1000 genomes]
rs57402724	1.00[EUR][1000 genomes]
rs57630507	1.00[EUR][1000 genomes]
rs58381452	1.00[EUR][1000 genomes]
rs58742544	1.00[EUR][1000 genomes]
rs59023483	1.00[EUR][1000 genomes]
rs59618733	1.00[EUR][1000 genomes]
rs59776629	1.00[EUR][1000 genomes]
rs59868150	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60050075	1.00[EUR][1000 genomes]
rs60121998	1.00[EUR][1000 genomes]
rs61244656	1.00[EUR][1000 genomes]
rs61600663	1.00[EUR][1000 genomes]
rs6449978	1.00[EUR][1000 genomes]
rs6449979	1.00[EUR][1000 genomes]
rs6861518	1.00[EUR][1000 genomes]
rs6862265	1.00[EUR][1000 genomes]
rs6867202	1.00[EUR][1000 genomes]
rs6867735	1.00[EUR][1000 genomes]
rs6876368	1.00[EUR][1000 genomes]
rs6878268	1.00[EUR][1000 genomes]
rs6883147	1.00[EUR][1000 genomes]
rs6883399	1.00[EUR][1000 genomes]
rs6893921	1.00[EUR][1000 genomes]
rs6897175	1.00[EUR][1000 genomes]
rs73114938	1.00[EUR][1000 genomes]
rs73114940	1.00[EUR][1000 genomes]
rs73114965	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73114968	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73114969	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73114971	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73775816	1.00[EUR][1000 genomes]
rs73775825	1.00[EUR][1000 genomes]
rs73775832	1.00[EUR][1000 genomes]
rs73775842	1.00[EUR][1000 genomes]
rs7708858	1.00[EUR][1000 genomes]
rs7712243	1.00[EUR][1000 genomes]
rs7717178	1.00[EUR][1000 genomes]
rs7717340	1.00[EUR][1000 genomes]
rs7720166	1.00[EUR][1000 genomes]
rs7725200	1.00[EUR][1000 genomes]
rs7727281	1.00[EUR][1000 genomes]
rs7735079	1.00[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68338400-68342200	Enhancers	K562	blood
2	chr5:68339200-68342200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr5:68339200-68342200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:68339200-68342200	Weak transcription	Hela-S3	cervix
5	chr5:68339400-68341600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr5:68339400-68342200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr5:68339400-68345600	Weak transcription	HSMMtube	muscle
8	chr5:68339600-68342200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr5:68339600-68342200	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr5:68339800-68342200	Weak transcription	A549	lung
11	chr5:68339800-68344800	Weak transcription	HepG2	liver
12	chr5:68340000-68342200	Weak transcription	Liver	Liver
13	chr5:68340000-68345600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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