Variant report

Variant	rs60121998
Chromosome Location	chr5:68292025-68292026
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs16898216	1.00[EUR][1000 genomes]
rs16898225	1.00[EUR][1000 genomes]
rs16898237	1.00[EUR][1000 genomes]
rs16898243	1.00[EUR][1000 genomes]
rs16898397	1.00[EUR][1000 genomes]
rs1873431	1.00[EUR][1000 genomes]
rs28502210	1.00[EUR][1000 genomes]
rs56292773	1.00[EUR][1000 genomes]
rs57402724	1.00[EUR][1000 genomes]
rs57630507	1.00[EUR][1000 genomes]
rs58381452	1.00[EUR][1000 genomes]
rs58742544	1.00[EUR][1000 genomes]
rs59023483	1.00[EUR][1000 genomes]
rs59618733	1.00[EUR][1000 genomes]
rs59776629	1.00[EUR][1000 genomes]
rs59868150	1.00[EUR][1000 genomes]
rs60050075	1.00[EUR][1000 genomes]
rs61244656	1.00[EUR][1000 genomes]
rs61600663	1.00[EUR][1000 genomes]
rs6449976	1.00[EUR][1000 genomes]
rs6449978	1.00[EUR][1000 genomes]
rs6449979	1.00[EUR][1000 genomes]
rs6861518	1.00[EUR][1000 genomes]
rs6862265	1.00[EUR][1000 genomes]
rs6867202	1.00[EUR][1000 genomes]
rs6867735	1.00[EUR][1000 genomes]
rs6876368	1.00[EUR][1000 genomes]
rs6878268	1.00[EUR][1000 genomes]
rs6883147	1.00[EUR][1000 genomes]
rs6883399	1.00[EUR][1000 genomes]
rs6893921	1.00[EUR][1000 genomes]
rs6897175	1.00[EUR][1000 genomes]
rs73114938	1.00[EUR][1000 genomes]
rs73114940	1.00[EUR][1000 genomes]
rs73114961	1.00[EUR][1000 genomes]
rs73114965	1.00[EUR][1000 genomes]
rs73114968	1.00[EUR][1000 genomes]
rs73114969	1.00[EUR][1000 genomes]
rs73114971	1.00[EUR][1000 genomes]
rs73770326	1.00[EUR][1000 genomes]
rs73770327	1.00[EUR][1000 genomes]
rs73775816	1.00[EUR][1000 genomes]
rs73775825	1.00[EUR][1000 genomes]
rs73775832	1.00[EUR][1000 genomes]
rs73775842	1.00[EUR][1000 genomes]
rs7708858	1.00[EUR][1000 genomes]
rs7712243	1.00[EUR][1000 genomes]
rs7717178	1.00[EUR][1000 genomes]
rs7717340	1.00[EUR][1000 genomes]
rs7720166	1.00[EUR][1000 genomes]
rs7725200	1.00[EUR][1000 genomes]
rs7727281	1.00[EUR][1000 genomes]
rs7735079	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1001926	chr5:68281457-68292160	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68290400-68292200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr5:68290600-68292200	Enhancers	HMEC	breast
3	chr5:68290800-68292200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr5:68290800-68292200	Enhancers	NHEK	skin
5	chr5:68291600-68292200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr5:68292000-68296200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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