The 2.0 version of rSNPBase

Variant report

Variant rs73854352
Chromosome Location chr3:105376105-105376106
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105366000-105377200 Weak transcription NHDF-Ad bronchial
2 chr3:105367400-105377600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:105368600-105376800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr3:105368800-105376800 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr3:105368800-105377600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:105368800-105388400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr3:105368800-105393400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr3:105371400-105377400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr3:105371400-105382200 Weak transcription Lung lung
10 chr3:105371800-105377200 Weak transcription Fetal Stomach stomach
11 chr3:105372000-105381800 Weak transcription Pancreas Pancrea
12 chr3:105372200-105377000 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr3:105372200-105380800 Weak transcription H9 Cell Line embryonic stem cell
14 chr3:105372200-105387400 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr3:105372400-105376400 Weak transcription Primary B cells from peripheral blood blood
16 chr3:105372400-105388000 Weak transcription Stomach Mucosa stomach
17 chr3:105373000-105377200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr3:105373000-105377600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:105373000-105381800 Weak transcription Right Ventricle heart
20 chr3:105373000-105387800 Weak transcription Gastric stomach
21 chr3:105373000-105419600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr3:105373200-105376400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr3:105373400-105376200 Weak transcription Primary B cells from cord blood blood
24 chr3:105373400-105376600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr3:105373400-105376600 Weak transcription Placenta Placenta
26 chr3:105373400-105401600 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr3:105373600-105419600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr3:105373800-105406200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr3:105374200-105376600 Weak transcription Placenta Amnion Placenta Amnion
30 chr3:105374200-105388400 Weak transcription Brain Hippocampus Middle brain
31 chr3:105374200-105392600 Weak transcription Psoas Muscle Psoas
32 chr3:105374400-105376600 Weak transcription Primary hematopoietic stem cells blood
33 chr3:105374400-105377000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr3:105374400-105377000 Weak transcription Fetal Kidney kidney
35 chr3:105374400-105388000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr3:105374600-105376200 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr3:105374600-105376800 Weak transcription Brain Germinal Matrix brain
38 chr3:105374600-105377000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr3:105374600-105377000 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr3:105374600-105377000 Weak transcription Stomach Smooth Muscle stomach
41 chr3:105374600-105377200 Weak transcription Left Ventricle heart
42 chr3:105374600-105377200 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr3:105374600-105377400 Weak transcription Ovary ovary
44 chr3:105374800-105376400 Enhancers Fetal Intestine Small intestine
45 chr3:105374800-105376600 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr3:105374800-105376600 Enhancers Fetal Heart heart
47 chr3:105374800-105381000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr3:105374800-105392800 Weak transcription Colon Smooth Muscle Colon
49 chr3:105375000-105376600 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr3:105375000-105376600 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015