The 2.0 version of rSNPBase

Variant report

Variant rs73854889
Chromosome Location chr3:105523848-105523849
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105483200-105555200 Weak transcription Placenta Placenta
2 chr3:105489600-105525400 Weak transcription Fetal Intestine Small intestine
3 chr3:105505000-105527800 Weak transcription Pancreas Pancrea
4 chr3:105505000-105548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:105509800-105527800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:105511400-105566400 Weak transcription Aorta Aorta
7 chr3:105512200-105527200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr3:105512200-105534200 Weak transcription Left Ventricle heart
9 chr3:105512400-105524400 Weak transcription NHLF lung
10 chr3:105512600-105524000 Weak transcription HSMMtube muscle
11 chr3:105512600-105524600 Weak transcription Colon Smooth Muscle Colon
12 chr3:105512600-105525200 Weak transcription HSMM muscle
13 chr3:105515400-105528200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr3:105515400-105539000 Weak transcription Fetal Muscle Trunk muscle
15 chr3:105517800-105524800 Weak transcription A549 lung
16 chr3:105517800-105525400 Weak transcription Fetal Intestine Large intestine
17 chr3:105517800-105527800 Weak transcription Fetal Kidney kidney
18 chr3:105517800-105528200 Weak transcription Brain Substantia Nigra brain
19 chr3:105517800-105528400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr3:105518400-105524200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr3:105518400-105525600 Weak transcription Primary hematopoietic stem cells blood
22 chr3:105518400-105525800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr3:105518800-105524200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr3:105519200-105541600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr3:105519400-105524800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr3:105519400-105527800 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr3:105520600-105525200 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr3:105520800-105524200 Weak transcription Muscle Satellite Cultured Cells --
29 chr3:105520800-105524200 Weak transcription Right Atrium heart
30 chr3:105520800-105525200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr3:105520800-105531400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr3:105521200-105524000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr3:105521200-105524000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr3:105521200-105524000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr3:105521200-105524000 Weak transcription Small Intestine intestine
36 chr3:105521200-105524000 Strong transcription NH-A brain
37 chr3:105521200-105524200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr3:105521200-105525000 Weak transcription NHDF-Ad bronchial
39 chr3:105521200-105525800 Weak transcription Primary T cells fromperipheralblood blood
40 chr3:105521200-105527800 Weak transcription Fetal Lung lung
41 chr3:105521200-105530200 Weak transcription HMEC breast
42 chr3:105521200-105531200 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr3:105521200-105536000 Weak transcription Right Ventricle heart
44 chr3:105521200-105546800 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr3:105521400-105524000 Strong transcription Osteobl bone
46 chr3:105521400-105524200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr3:105521400-105524400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr3:105521400-105525400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr3:105521400-105528200 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr3:105521400-105529200 Weak transcription Psoas Muscle Psoas

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015