The 2.0 version of rSNPBase

Variant report

Variant rs59294274
Chromosome Location chr3:105527964-105527965
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105483200-105555200 Weak transcription Placenta Placenta
2 chr3:105505000-105548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:105511400-105566400 Weak transcription Aorta Aorta
4 chr3:105512200-105534200 Weak transcription Left Ventricle heart
5 chr3:105515400-105528200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr3:105515400-105539000 Weak transcription Fetal Muscle Trunk muscle
7 chr3:105517800-105528200 Weak transcription Brain Substantia Nigra brain
8 chr3:105517800-105528400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr3:105519200-105541600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr3:105520800-105531400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr3:105521200-105530200 Weak transcription HMEC breast
12 chr3:105521200-105531200 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr3:105521200-105536000 Weak transcription Right Ventricle heart
14 chr3:105521200-105546800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr3:105521400-105528200 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr3:105521400-105529200 Weak transcription Psoas Muscle Psoas
17 chr3:105521400-105530200 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr3:105521400-105541200 Weak transcription Fetal Muscle Leg muscle
19 chr3:105521400-105542000 Weak transcription Fetal Stomach stomach
20 chr3:105521600-105528000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr3:105521600-105530200 Weak transcription Primary B cells from peripheral blood blood
22 chr3:105522200-105528400 Weak transcription Fetal Heart heart
23 chr3:105522400-105529800 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr3:105522400-105533800 Weak transcription Brain Germinal Matrix brain
25 chr3:105522400-105541200 Weak transcription Primary T cells from cord blood blood
26 chr3:105523000-105530000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr3:105524000-105529000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:105524000-105530800 Weak transcription NH-A brain
29 chr3:105524200-105532200 Enhancers Primary T helper cells PMA-I stimulated --
30 chr3:105524600-105530000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr3:105524600-105530200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr3:105524600-105541600 Weak transcription Right Atrium heart
33 chr3:105525400-105528800 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr3:105525600-105540200 Weak transcription NHLF lung
35 chr3:105525800-105528000 Weak transcription Liver Liver
36 chr3:105525800-105528200 Weak transcription Colon Smooth Muscle Colon
37 chr3:105525800-105530200 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr3:105525800-105531200 Weak transcription HSMM muscle
39 chr3:105526000-105528200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr3:105526000-105528200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr3:105526000-105530400 Weak transcription GM12878-XiMat blood
42 chr3:105526000-105530400 Weak transcription NHEK skin
43 chr3:105526000-105531000 Weak transcription HUVEC blood vessel
44 chr3:105526200-105528000 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr3:105526200-105528200 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr3:105526200-105528400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:105526200-105530200 Weak transcription NHDF-Ad bronchial
48 chr3:105526200-105534000 Weak transcription Primary T cells fromperipheralblood blood
49 chr3:105526200-105541600 Weak transcription Primary hematopoietic stem cells blood
50 chr3:105526200-105542400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015