The 2.0 version of rSNPBase

Variant report

Variant rs59347770
Chromosome Location chr3:105519595-105519596
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105483200-105555200 Weak transcription Placenta Placenta
2 chr3:105489600-105525400 Weak transcription Fetal Intestine Small intestine
3 chr3:105505000-105527800 Weak transcription Pancreas Pancrea
4 chr3:105505000-105548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:105509800-105527800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:105510600-105521200 Weak transcription Fetal Brain Male brain
7 chr3:105511400-105566400 Weak transcription Aorta Aorta
8 chr3:105511800-105520400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr3:105512000-105520600 Weak transcription H9 Cell Line embryonic stem cell
10 chr3:105512200-105520200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr3:105512200-105520400 Weak transcription Brain Cingulate Gyrus brain
12 chr3:105512200-105527200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr3:105512200-105534200 Weak transcription Left Ventricle heart
14 chr3:105512400-105524400 Weak transcription NHLF lung
15 chr3:105512600-105520400 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr3:105512600-105524000 Weak transcription HSMMtube muscle
17 chr3:105512600-105524600 Weak transcription Colon Smooth Muscle Colon
18 chr3:105512600-105525200 Weak transcription HSMM muscle
19 chr3:105514400-105521600 Enhancers Primary B cells from peripheral blood blood
20 chr3:105515400-105528200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr3:105515400-105539000 Weak transcription Fetal Muscle Trunk muscle
22 chr3:105515800-105521600 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr3:105516000-105521600 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr3:105516000-105521600 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr3:105516200-105522200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr3:105516400-105521000 Enhancers Primary T cells from cord blood blood
27 chr3:105516400-105521800 Enhancers Primary T helper cells fromperipheralblood blood
28 chr3:105516600-105519800 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr3:105516600-105522000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr3:105516600-105523000 Enhancers HUES64 Cell Line embryonic stem cell
31 chr3:105516800-105519800 Enhancers iPS-20b Cell Line embryonic stem cell
32 chr3:105517400-105519600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr3:105517400-105519800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr3:105517800-105519600 Genic enhancers Osteobl bone
35 chr3:105517800-105519800 Weak transcription Fetal Heart heart
36 chr3:105517800-105520400 Weak transcription Brain Hippocampus Middle brain
37 chr3:105517800-105520800 Weak transcription Fetal Muscle Leg muscle
38 chr3:105517800-105521000 Weak transcription NH-A brain
39 chr3:105517800-105522000 Enhancers Primary B cells from cord blood blood
40 chr3:105517800-105522200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr3:105517800-105524800 Weak transcription A549 lung
42 chr3:105517800-105525400 Weak transcription Fetal Intestine Large intestine
43 chr3:105517800-105527800 Weak transcription Fetal Kidney kidney
44 chr3:105517800-105528200 Weak transcription Brain Substantia Nigra brain
45 chr3:105517800-105528400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr3:105518000-105521200 Weak transcription Brain Angular Gyrus brain
47 chr3:105518200-105521000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr3:105518200-105521400 Enhancers HUES48 Cell Line embryonic stem cell
49 chr3:105518400-105519600 Weak transcription Brain Inferior Temporal Lobe brain
50 chr3:105518400-105520400 Weak transcription H1 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015