Variant report

Variant	rs7528792
Chromosome Location	chr1:71558865-71558866
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10493482	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11577923	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11578414	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11800532	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11801478	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11808123	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12402425	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12409826	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1418448	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17090804	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17090955	0.87[AMR][1000 genomes]
rs2744901	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2744903	0.85[EUR][1000 genomes]
rs2744909	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2817867	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs57667850	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs59019236	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6699719	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72942304	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7545836	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7554527	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9425051	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71555600-71560400	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr1:71556000-71559800	Weak transcription	Colon Smooth Muscle	Colon
3	chr1:71556400-71559600	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr1:71556400-71560800	Weak transcription	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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