Variant report

Variant	rs7554527
Chromosome Location	chr1:71567838-71567839
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10493482	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11577923	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11578414	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11800532	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11801478	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11808123	0.82[CEU][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12402425	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12409826	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1418448	0.92[EUR][1000 genomes]
rs17090804	1.00[CEU][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17090955	0.81[AMR][1000 genomes]
rs2744901	1.00[CEU][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2744903	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2744909	1.00[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2796200	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs2817867	1.00[CEU][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs57667850	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs59019236	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6699719	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72942304	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7528792	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7545836	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9425051	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71567600-71568000	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr1:71567600-71568000	Enhancers	H9 Cell Line	embryonic stem cell
3	chr1:71567600-71568000	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr1:71567600-71568000	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr1:71567600-71568000	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr1:71567600-71568000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr1:71567600-71568000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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