The 2.0 version of rSNPBase

Variant report

Variant rs7531652
Chromosome Location chr1:172510148-172510149
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172503400-172511200 Weak transcription Spleen Spleen
2 chr1:172503400-172511400 Weak transcription Gastric stomach
3 chr1:172503400-172528600 Weak transcription Aorta Aorta
4 chr1:172503400-172528600 Weak transcription Lung lung
5 chr1:172503600-172511400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:172503600-172511400 Weak transcription Primary T cells fromperipheralblood blood
7 chr1:172503600-172513600 Weak transcription Psoas Muscle Psoas
8 chr1:172503600-172520200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr1:172503600-172531600 Weak transcription Esophagus oesophagus
10 chr1:172503800-172529000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:172503800-172534200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:172504000-172511600 Weak transcription Stomach Smooth Muscle stomach
13 chr1:172504000-172524400 Weak transcription HSMM muscle
14 chr1:172504200-172515200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr1:172504200-172527000 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:172504400-172519400 Enhancers Primary T helper cells fromperipheralblood blood
17 chr1:172504800-172511600 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:172504800-172516200 Weak transcription HUVEC blood vessel
19 chr1:172505200-172518800 Weak transcription Brain Angular Gyrus brain
20 chr1:172505400-172510800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:172505400-172511600 Weak transcription Primary B cells from peripheral blood blood
22 chr1:172505400-172511600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:172505600-172510400 Weak transcription A549 lung
24 chr1:172505800-172519600 Enhancers Primary T helper cells PMA-I stimulated --
25 chr1:172506000-172511600 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr1:172506000-172512000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:172506000-172519000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:172506000-172532600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:172506200-172511600 Weak transcription Primary monocytes fromperipheralblood blood
30 chr1:172506200-172511600 Weak transcription Primary B cells from cord blood blood
31 chr1:172506200-172525000 Weak transcription Duodenum Mucosa Duodenum
32 chr1:172506200-172526200 Weak transcription Fetal Intestine Large intestine
33 chr1:172506200-172528400 Weak transcription Fetal Stomach stomach
34 chr1:172506600-172510800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr1:172507000-172510800 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr1:172507000-172516000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:172507200-172510600 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:172507200-172516800 Weak transcription Brain Germinal Matrix brain
39 chr1:172507200-172518400 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:172507400-172511600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:172507400-172513000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:172507400-172513400 Weak transcription K562 blood
43 chr1:172507400-172513800 Weak transcription Stomach Mucosa stomach
44 chr1:172507400-172515000 Weak transcription Right Atrium heart
45 chr1:172507400-172516400 Weak transcription Brain Cingulate Gyrus brain
46 chr1:172507400-172517600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:172507400-172518400 Weak transcription NHEK skin
48 chr1:172507400-172523000 Weak transcription NHDF-Ad bronchial
49 chr1:172507400-172526400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:172507400-172528600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015