The 2.0 version of rSNPBase

Variant report

Variant rs6695152
Chromosome Location chr1:172507712-172507713
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172503200-172509200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:172503400-172511200 Weak transcription Spleen Spleen
3 chr1:172503400-172511400 Weak transcription Gastric stomach
4 chr1:172503400-172528600 Weak transcription Aorta Aorta
5 chr1:172503400-172528600 Weak transcription Lung lung
6 chr1:172503600-172508200 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr1:172503600-172511400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:172503600-172511400 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:172503600-172513600 Weak transcription Psoas Muscle Psoas
10 chr1:172503600-172520200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:172503600-172531600 Weak transcription Esophagus oesophagus
12 chr1:172503800-172508600 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr1:172503800-172509400 Weak transcription HSMMtube muscle
14 chr1:172503800-172529000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:172503800-172534200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:172504000-172511600 Weak transcription Stomach Smooth Muscle stomach
17 chr1:172504000-172524400 Weak transcription HSMM muscle
18 chr1:172504200-172508000 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr1:172504200-172515200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr1:172504200-172527000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:172504400-172519400 Enhancers Primary T helper cells fromperipheralblood blood
22 chr1:172504600-172508800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:172504800-172508200 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr1:172504800-172508200 Enhancers HMEC breast
25 chr1:172504800-172509200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:172504800-172509200 Weak transcription Thymus Thymus
27 chr1:172504800-172510000 Enhancers Primary T cells from cord blood blood
28 chr1:172504800-172510000 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr1:172504800-172511600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr1:172504800-172516200 Weak transcription HUVEC blood vessel
31 chr1:172505000-172508000 Weak transcription Fetal Kidney kidney
32 chr1:172505000-172509200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:172505200-172518800 Weak transcription Brain Angular Gyrus brain
34 chr1:172505400-172508200 Enhancers H1 Cell Line embryonic stem cell
35 chr1:172505400-172509200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:172505400-172509600 Weak transcription Brain Hippocampus Middle brain
37 chr1:172505400-172510800 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr1:172505400-172511600 Weak transcription Primary B cells from peripheral blood blood
39 chr1:172505400-172511600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:172505600-172509200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:172505600-172509800 Weak transcription Brain Substantia Nigra brain
42 chr1:172505600-172510400 Weak transcription A549 lung
43 chr1:172505800-172519600 Enhancers Primary T helper cells PMA-I stimulated --
44 chr1:172506000-172508000 Enhancers Pancreatic Islets Pancreatic Islet
45 chr1:172506000-172509000 Weak transcription Primary hematopoietic stem cells blood
46 chr1:172506000-172509400 Weak transcription Fetal Lung lung
47 chr1:172506000-172509400 Weak transcription Rectal Smooth Muscle rectum
48 chr1:172506000-172509600 Weak transcription Liver Liver
49 chr1:172506000-172511600 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr1:172506000-172512000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015