Variant report

Variant	rs7549881
Chromosome Location	chr1:66984584-66984585
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:66984152..66984672-chr15:78832128..78833000,3	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000041357	Chromatin interaction

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10493408	1.00[ASN][1000 genomes]
rs11208896	1.00[ASN][1000 genomes]
rs11208897	0.81[ASN][1000 genomes]
rs11208898	0.99[ASN][1000 genomes]
rs11208900	0.92[ASN][1000 genomes]
rs11208901	0.92[ASN][1000 genomes]
rs11208902	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12022565	1.00[ASN][1000 genomes]
rs12040232	1.00[ASN][1000 genomes]
rs12043594	1.00[ASN][1000 genomes]
rs12567898	0.94[ASN][1000 genomes]
rs12568801	0.98[ASN][1000 genomes]
rs1338196	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1338199	1.00[ASN][1000 genomes]
rs1338201	0.98[ASN][1000 genomes]
rs1338202	1.00[ASN][1000 genomes]
rs1338203	1.00[ASN][1000 genomes]
rs1338206	1.00[ASN][1000 genomes]
rs1338207	1.00[ASN][1000 genomes]
rs1445578	0.92[ASN][1000 genomes]
rs1445579	0.92[ASN][1000 genomes]
rs17129039	1.00[ASN][1000 genomes]
rs17129041	1.00[ASN][1000 genomes]
rs17129043	1.00[ASN][1000 genomes]
rs17129062	0.92[ASN][1000 genomes]
rs17129064	0.92[ASN][1000 genomes]
rs4655614	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655616	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57941297	0.92[ASN][1000 genomes]
rs6664942	1.00[ASN][1000 genomes]
rs6665299	1.00[ASN][1000 genomes]
rs6689119	1.00[ASN][1000 genomes]
rs6689313	1.00[ASN][1000 genomes]
rs6693644	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6699123	0.94[ASN][1000 genomes]
rs6699568	0.94[ASN][1000 genomes]
rs72934129	1.00[ASN][1000 genomes]
rs72934131	1.00[ASN][1000 genomes]
rs72934142	1.00[ASN][1000 genomes]
rs72934143	1.00[ASN][1000 genomes]
rs72934153	0.84[ASN][1000 genomes]
rs7532400	0.94[ASN][1000 genomes]
rs7532598	0.92[ASN][1000 genomes]
rs7532613	0.92[ASN][1000 genomes]
rs7533806	1.00[ASN][1000 genomes]
rs7533837	1.00[ASN][1000 genomes]
rs7544247	0.94[ASN][1000 genomes]
rs7544505	0.92[ASN][1000 genomes]
rs967324	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:66975800-66985600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr1:66983600-66987200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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