Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11540495	0.86[EUR][1000 genomes]
rs11893776	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs11894281	0.95[EUR][1000 genomes]
rs11904498	0.84[EUR][1000 genomes]
rs17028097	0.84[EUR][1000 genomes]
rs57135216	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs58169051	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59719539	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs60414642	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6714745	0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap];0.81[YRI][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6727909	0.90[ASW][hapmap];0.89[CEU][hapmap];0.94[GIH][hapmap];0.88[MEX][hapmap];0.84[YRI][hapmap]
rs6740299	0.82[ASW][hapmap];0.89[CEU][hapmap];1.00[GIH][hapmap];0.81[YRI][hapmap]
rs72889330	0.84[EUR][1000 genomes]
rs72889367	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72889380	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72889381	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72889398	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72889399	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72891012	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73934749	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834242	chr2:63891249-64045617	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:63926800-63939800	Weak transcription	Adipose Nuclei	Adipose
2	chr2:63926800-63956600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr2:63936200-63944400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr2:63936600-63940200	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr2:63936800-63937600	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr2:63937200-63940600	Enhancers	Psoas Muscle	Psoas

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